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BDBM5167

E3L000038
Internal ID: BDB000038
Activity data available Local docking-ready structure
Dock with O95365
Structure
/e3_file/ligand_db/generated/BDB000038/BDB000038.sdf
Basic Properties
Compound ID
E3L000038
Internal ID
BDB000038
Molecular formula
C26H21N7O4
Molecular weight
495.499000
Exact mass
495.165502
XLogP
2.4835
TPSA
139.1800
HBA / HBD
8 / 2
Rotatable bonds
4
Heavy atoms / rings
37 / 6
Activity summary
EC50 > 100.00000000 nM
1 activity record(s) imported
InChIKey
XDAZNDTUZSCSGL-UHFFFAOYSA-N
SMILES
Cc1cc(-c2cc3c(cnn3C)cc2Nc2cccc3c2C(=O)N(C2CCC(=O)NC2=O)C3=O)cnn1
Aliases
BDBM5167 (preferred) 2-(2,6-dioxopiperidin-3-yl)-4-((1-methyl-6-(6-methylpyridazin-4-yl)-1H-indazol-5-yl)amino)isoindoline-1,3-dione (source_name) BDBM5167 (source_id)
E3 Relation
E3 UniProt Gene / protein Relation type Ligand role Direct Functional Docking Source Evidence
O95365 ZBTB7A;FBI1;LRF;ZBTB7;ZNF857A
Zinc finger and BTB domain-containing protein 7A		 reported_binder bindingdb_reported Yes No low BindingDB:BDBM5167 medium
; target=Zinc finger and BTB domain-containing protein 7A
Sources and Literature
Source Source ID Source URL Download URL DOI / PMID
BindingDB BDBM5167 Open - 10.7270/Q24X5DJ6
PubChem CID171554206 Open -
Structure Files
Kind Format Status Docking use File / link Preparation note
canonical_2d SMILES raw Docking-ready Cc1cc(-c2cc3c(cnn3C)cc2Nc2cccc3c2C(=O)N(C2CCC(=O)NC2=O)C3=O)cnn1 keep_bindingdb_unique
generated_3d SDF prepared Docking-ready public/e3_file/ligand_db/generated/BDB000038/BDB000038.sdf Generated from canonical SMILES
generated_3d MOL2 prepared Docking-ready public/e3_file/ligand_db/generated/BDB000038/BDB000038.mol2 Generated from canonical SMILES
docking_ready PDBQT prepared Docking-ready public/e3_file/ligand_db/generated/BDB000038/BDB000038.pdbqt Generated from canonical SMILES
image PNG prepared Reference public/e3_file/ligand_db/generated/BDB000038/BDB000038.png Generated from canonical SMILES
image SVG prepared Reference public/e3_file/ligand_db/generated/BDB000038/BDB000038.svg Generated from canonical SMILES
Activity
Target Source Assay Result Potency Literature Records
Zinc finger and BTB domain-containing protein 7A
O95365
E3 ligase component 		BindingDB:BDBM5167 EC50 >100 nM Uncertain DOI: 10.7270/Q24X5DJ6 1