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BDBM17345

E3L000242

Internal ID: BDB000242

Activity data available Local docking-ready structure

Dock with P98170 Dock with Q13489 Dock with Q13490 Dock with Q96CA5

Structure

/e3_file/ligand_db/generated/BDB000242/BDB000242.sdf

Basic Properties

Compound ID

E3L000242

Internal ID

BDB000242

Molecular formula

C25H34N6O3S

Molecular weight

498.653000

Exact mass

498.241310

XLogP

2.4445

TPSA

108.3600

HBA / HBD

6 / 3

Rotatable bonds

Heavy atoms / rings

35 / 4

Activity summary

Ki unknown 50.00000000 nM
5 activity record(s) imported

InChIKey

RBLGKKZTMVKMNE-XIGKFDRGSA-N

SMILES

CN[C@@H](C)C(=O)N[C@H]1CCC[C@H]2SC(C)(C)[C@@H](C(=O)Nc3cc(C)nn3-c3ccccc3)N2C1=O

Aliases

BDBM17345 (preferred) (3R,6S,9aR)-2,2-dimethyl-N-(3-methyl-1-phenyl-1H-pyrazol-5-yl)-6-[(2S)-2-(methylamino)propanamido]-5-oxo-octahydroazepino[2,1-b][1,3]thiazole-3-carboxamide (source_name) BDBM17345 (source_id)

E3 Relation

E3 UniProt	Gene / protein	Relation type	Ligand role	Direct	Functional	Docking	Source	Evidence
P98170	XIAP;API3;BIRC4;IAP3 E3 ubiquitin-protein ligase XIAP	reported_binder	bindingdb_reported	Yes	No	low	BindingDB:BDBM17345	medium ; target=Baculoviral IAP repeat-containing protein 7 E3 ubiquitin-protein ligase XIAP; E3 ubiquitin-protein ligase XIAP
Q13489	BIRC3;API2;MIHC;RNF49 Baculoviral IAP repeat-containing protein 3	reported_binder	bindingdb_reported	Yes	No	low	BindingDB:BDBM17345	medium ; target=Baculoviral IAP repeat-containing protein 3
Q13490	BIRC2;API1;MIHB;RNF48 Baculoviral IAP repeat-containing protein 2	reported_binder	bindingdb_reported	Yes	No	low	BindingDB:BDBM17345	medium ; target=Baculoviral IAP repeat-containing protein 2
Q96CA5	BIRC7;KIAP;LIVIN;MLIAP;RNF50;UNQ5800/PRO19607/PRO21344 Baculoviral IAP repeat-containing protein 7	reported_binder	bindingdb_reported	Yes	No	low	BindingDB:BDBM17345	medium ; target=Baculoviral IAP repeat-containing protein 7 E3 ubiquitin-protein ligase XIAP

Sources and Literature

Source	Source ID	Source URL	Download URL	DOI / PMID
BindingDB	BDBM17345	Open	-	10.1021/cb600276q PMID: 17168540
PubChem	CID23647740	Open	-

Structure Files

Kind	Format	Status	Docking use	File / link	Preparation note
canonical_2d	SMILES	raw	Docking-ready	CN[C@@H](C)C(=O)N[C@H]1CCC[C@H]2SC(C)(C)[C@@H](C(=O)Nc3cc(C)nn3-c3ccccc3)N2C1=O	keep_bindingdb_unique
generated_3d	SDF	prepared	Docking-ready	public/e3_file/ligand_db/generated/BDB000242/BDB000242.sdf	Generated from canonical SMILES
generated_3d	MOL2	prepared	Docking-ready	public/e3_file/ligand_db/generated/BDB000242/BDB000242.mol2	Generated from canonical SMILES
docking_ready	PDBQT	prepared	Docking-ready	public/e3_file/ligand_db/generated/BDB000242/BDB000242.pdbqt	Generated from canonical SMILES
image	PNG	prepared	Reference	public/e3_file/ligand_db/generated/BDB000242/BDB000242.png	Generated from canonical SMILES
image	SVG	prepared	Reference	public/e3_file/ligand_db/generated/BDB000242/BDB000242.svg	Generated from canonical SMILES

Activity

Target	Source	Assay	Result	Potency	Literature	Records
Baculoviral IAP repeat-containing protein 2 Q13490 E3 ligase component	BindingDB:BDBM17345	Ki	50 nM	High	DOI: 10.1021/cb600276q PMID: 17168540	1
Baculoviral IAP repeat-containing protein 3 Q13489 E3 ligase component	BindingDB:BDBM17345	Ki	130 nM	Moderate	DOI: 10.1021/cb600276q PMID: 17168540	1
Baculoviral IAP repeat-containing protein 7 E3 ubiquitin-protein ligase XIAP P98170 E3 ligase component	BindingDB:BDBM17345	Ki	50 nM	High	DOI: 10.1021/cb600276q PMID: 17168540	1
Baculoviral IAP repeat-containing protein 7 E3 ubiquitin-protein ligase XIAP Q96CA5 E3 ligase component	BindingDB:BDBM17345	Ki	50 nM	High	DOI: 10.1021/cb600276q PMID: 17168540	1
E3 ubiquitin-protein ligase XIAP P98170 E3 ligase component	BindingDB:BDBM17345	Ki	770 nM	Moderate	DOI: 10.1021/cb600276q PMID: 17168540	1