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BDBM17966

E3L000273
Internal ID: BDB000273
Activity data available Local docking-ready structure
Dock with P00797
Structure
/e3_file/ligand_db/generated/BDB000273/BDB000273.sdf
Basic Properties
Compound ID
E3L000273
Internal ID
BDB000273
Molecular formula
C32H34N2O5
Molecular weight
526.633000
Exact mass
526.246772
XLogP
5.2179
TPSA
69.2600
HBA / HBD
6 / 1
Rotatable bonds
12
Heavy atoms / rings
39 / 5
Activity summary
IC50 unknown 54.00000000 nM
3 activity record(s) imported
InChIKey
YNZFVUGNLOWSTD-MUUNZHRXSA-N
SMILES
COc1ccccc1COCCCOc1ccc(N2C(=O)CNC[C@@H]2COc2ccc3ccccc3c2)cc1
Aliases
BDBM17966 (preferred) (6R)-1-(4-{3-[(2-methoxyphenyl)methoxy]propoxy}phenyl)-6-[(naphthalen-2-yloxy)methyl]piperazin-2-one (source_name) BDBM17966 (source_id)
E3 Relation
E3 UniProt Gene / protein Relation type Ligand role Direct Functional Docking Source Evidence
P00797 REN
Renin		 reported_binder bindingdb_reported Yes No low BindingDB:BDBM17966 medium
; target=Renin
Sources and Literature
Source Source ID Source URL Download URL DOI / PMID
BindingDB BDBM17966 Open - 10.1016/j.bmc.2005.01.048; 10.1016/j.bmcl.2005.02.085; 10.1021/jm901885s PMID: 15755665; 15837327; 20731374
PubChem CID11214666 Open -
Structure Files
Kind Format Status Docking use File / link Preparation note
canonical_2d SMILES raw Docking-ready COc1ccccc1COCCCOc1ccc(N2C(=O)CNC[C@@H]2COc2ccc3ccccc3c2)cc1 keep_bindingdb_unique
generated_3d SDF prepared Docking-ready public/e3_file/ligand_db/generated/BDB000273/BDB000273.sdf Generated from canonical SMILES
generated_3d MOL2 prepared Docking-ready public/e3_file/ligand_db/generated/BDB000273/BDB000273.mol2 Generated from canonical SMILES
docking_ready PDBQT prepared Docking-ready public/e3_file/ligand_db/generated/BDB000273/BDB000273.pdbqt Generated from canonical SMILES
image PNG prepared Reference public/e3_file/ligand_db/generated/BDB000273/BDB000273.png Generated from canonical SMILES
image SVG prepared Reference public/e3_file/ligand_db/generated/BDB000273/BDB000273.svg Generated from canonical SMILES
Activity
Target Source Assay Result Potency Literature Records
Renin
P00797
E3 ligase component 		BindingDB:BDBM17966 IC50 54 nM High DOI: 10.1016/j.bmcl.2005.02.085
PMID: 15837327 		1
Renin
P00797
E3 ligase component 		BindingDB:BDBM17966 IC50 54 nM High DOI: 10.1021/jm901885s
PMID: 20731374 		1
Renin
P00797
E3 ligase component 		BindingDB:BDBM17966 IC50 54 nM High DOI: 10.1016/j.bmc.2005.01.048
PMID: 15755665 		1