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BDBM18341

E3L000418

Internal ID: BDB000418

Activity data available Local docking-ready structure

Dock with P00797

Structure

/e3_file/ligand_db/generated/BDB000418/BDB000418.sdf

Basic Properties

Compound ID

E3L000418

Internal ID

BDB000418

Molecular formula

C30H51N3O6

Molecular weight

549.753000

Exact mass

549.377786

XLogP

3.0606

TPSA

132.1400

HBA / HBD

7 / 4

Rotatable bonds

Heavy atoms / rings

39 / 2

Activity summary

IC50 unknown 2.00000000 nM
1 activity record(s) imported

InChIKey

BXRXSNOPXSYVNH-UUNMLIRYSA-N

SMILES

COCCCOc1cc(C[C@@H](C[C@H](N)[C@@H](O)C[C@H](C(=O)NC[C@H]2CCC(=O)N2)C(C)C)C(C)C)ccc1OC

Aliases

BDBM18341 (preferred) (2S,4S,5S,7S)-5-amino-4-hydroxy-7-{[4-methoxy-3-(3-methoxypropoxy)phenyl]methyl}-8-methyl-N-{[(2R)-5-oxopyrrolidin-2-yl]methyl}-2-(propan-2-yl)nonanamide (source_name) BDBM18341 (source_id)

E3 Relation

E3 UniProt	Gene / protein	Relation type	Ligand role	Direct	Functional	Docking	Source	Evidence
P00797	REN Renin	reported_binder	bindingdb_reported	Yes	No	low	BindingDB:BDBM18341	medium ; target=Renin

Sources and Literature

Source	Source ID	Source URL	Download URL	DOI / PMID
BindingDB	BDBM18341	Open	-	10.1021/jm070316i PMID: 17824680
PubChem	CID23626751	Open	-

Structure Files

Kind	Format	Status	Docking use	File / link	Preparation note
canonical_2d	SMILES	raw	Docking-ready	COCCCOc1cc(C[C@@H](C[C@H](N)[C@@H](O)C[C@H](C(=O)NC[C@H]2CCC(=O)N2)C(C)C)C(C)C)ccc1OC	keep_bindingdb_unique
generated_3d	SDF	prepared	Docking-ready	public/e3_file/ligand_db/generated/BDB000418/BDB000418.sdf	Generated from canonical SMILES
generated_3d	MOL2	prepared	Docking-ready	public/e3_file/ligand_db/generated/BDB000418/BDB000418.mol2	Generated from canonical SMILES
docking_ready	PDBQT	prepared	Docking-ready	public/e3_file/ligand_db/generated/BDB000418/BDB000418.pdbqt	Generated from canonical SMILES
image	PNG	prepared	Reference	public/e3_file/ligand_db/generated/BDB000418/BDB000418.png	Generated from canonical SMILES
image	SVG	prepared	Reference	public/e3_file/ligand_db/generated/BDB000418/BDB000418.svg	Generated from canonical SMILES

Activity

Target	Source	Assay	Result	Potency	Literature	Records
Renin P00797 E3 ligase component	BindingDB:BDBM18341	IC50	2 nM	Very high	DOI: 10.1021/jm070316i PMID: 17824680	1