< Back to small molecule database

BDBM18342

E3L000419
Internal ID: BDB000419
Activity data available Local docking-ready structure
Dock with P00797
Structure
/e3_file/ligand_db/generated/BDB000419/BDB000419.sdf
Basic Properties
Compound ID
E3L000419
Internal ID
BDB000419
Molecular formula
C31H55N3O6
Molecular weight
565.796000
Exact mass
565.409086
XLogP
3.1142
TPSA
115.5100
HBA / HBD
8 / 3
Rotatable bonds
19
Heavy atoms / rings
40 / 2
Activity summary
IC50 unknown 0.40000000 nM
1 activity record(s) imported
InChIKey
RFNPLSNMDRXZBX-LJWNLINESA-N
SMILES
COCCCOc1cc(C[C@@H](C[C@H](N)[C@@H](O)C[C@H](C(=O)NCCN2CCOCC2)C(C)C)C(C)C)ccc1OC
Aliases
BDBM18342 (preferred) (2S,4S,5S,7S)-5-amino-4-hydroxy-7-{[4-methoxy-3-(3-methoxypropoxy)phenyl]methyl}-8-methyl-N-[2-(morpholin-4-yl)ethyl]-2-(propan-2-yl)nonanamide (source_name) BDBM18342 (source_id)
E3 Relation
E3 UniProt Gene / protein Relation type Ligand role Direct Functional Docking Source Evidence
P00797 REN
Renin		 reported_binder bindingdb_reported Yes No low BindingDB:BDBM18342 medium
; target=Renin
Sources and Literature
Source Source ID Source URL Download URL DOI / PMID
BindingDB BDBM18342 Open - 10.1021/jm070316i PMID: 17824680
PubChem CID23626753 Open -
Structure Files
Kind Format Status Docking use File / link Preparation note
canonical_2d SMILES raw Docking-ready COCCCOc1cc(C[C@@H](C[C@H](N)[C@@H](O)C[C@H](C(=O)NCCN2CCOCC2)C(C)C)C(C)C)ccc1OC keep_bindingdb_unique
generated_3d SDF prepared Docking-ready public/e3_file/ligand_db/generated/BDB000419/BDB000419.sdf Generated from canonical SMILES
generated_3d MOL2 prepared Docking-ready public/e3_file/ligand_db/generated/BDB000419/BDB000419.mol2 Generated from canonical SMILES
docking_ready PDBQT prepared Docking-ready public/e3_file/ligand_db/generated/BDB000419/BDB000419.pdbqt Generated from canonical SMILES
image PNG prepared Reference public/e3_file/ligand_db/generated/BDB000419/BDB000419.png Generated from canonical SMILES
image SVG prepared Reference public/e3_file/ligand_db/generated/BDB000419/BDB000419.svg Generated from canonical SMILES
Activity
Target Source Assay Result Potency Literature Records
Renin
P00797
E3 ligase component 		BindingDB:BDBM18342 IC50 0.4 nM Very high DOI: 10.1021/jm070316i
PMID: 17824680 		1