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BDBM21840

E3L000525
Internal ID: BDB000525
Activity data available Local docking-ready structure
Dock with P37231 Dock with Q07869
Structure
/e3_file/ligand_db/generated/BDB000525/BDB000525.sdf
Basic Properties
Compound ID
E3L000525
Internal ID
BDB000525
Molecular formula
C23H25NO4
Molecular weight
379.456000
Exact mass
379.178358
XLogP
4.8287
TPSA
71.5500
HBA / HBD
3 / 2
Rotatable bonds
8
Heavy atoms / rings
28 / 4
Activity summary
EC50 unknown 3650.00000000 nM
2 activity record(s) imported
InChIKey
VWRDBVHONGAOAW-KRWDZBQOSA-N
SMILES
Cc1cc2cc(OCCCOc3ccc4c(c3)CC[C@H]4CC(=O)O)ccc2[nH]1
Aliases
BDBM21840 (preferred) 2-[(1S)-5-{3-[(2-methyl-1H-indol-5-yl)oxy]propoxy}-2,3-dihydro-1H-inden-1-yl]acetic acid (source_name) BDBM21840 (source_id)
E3 Relation
E3 UniProt Gene / protein Relation type Ligand role Direct Functional Docking Source Evidence
P37231 PPARG;NR1C3
Peroxisome proliferator-activated receptor gamma		 reported_binder bindingdb_reported Yes No low BindingDB:BDBM21840 medium
; target=Peroxisome proliferator-activated receptor gamma
Q07869 PPARA;NR1C1;PPAR
Peroxisome proliferator-activated receptor alpha		 reported_binder bindingdb_reported Yes No low BindingDB:BDBM21840 medium
; target=Peroxisome proliferator-activated receptor alpha
Sources and Literature
Source Source ID Source URL Download URL DOI / PMID
BindingDB BDBM21840 Open - 10.1021/jm061299k PMID: 17274610
PubChem CID24776393 Open -
Structure Files
Kind Format Status Docking use File / link Preparation note
canonical_2d SMILES raw Docking-ready Cc1cc2cc(OCCCOc3ccc4c(c3)CC[C@H]4CC(=O)O)ccc2[nH]1 keep_bindingdb_unique
generated_3d SDF prepared Docking-ready public/e3_file/ligand_db/generated/BDB000525/BDB000525.sdf Generated from canonical SMILES
generated_3d MOL2 prepared Docking-ready public/e3_file/ligand_db/generated/BDB000525/BDB000525.mol2 Generated from canonical SMILES
docking_ready PDBQT prepared Docking-ready public/e3_file/ligand_db/generated/BDB000525/BDB000525.pdbqt Generated from canonical SMILES
image PNG prepared Reference public/e3_file/ligand_db/generated/BDB000525/BDB000525.png Generated from canonical SMILES
image SVG prepared Reference public/e3_file/ligand_db/generated/BDB000525/BDB000525.svg Generated from canonical SMILES
Activity
Target Source Assay Result Potency Literature Records
Peroxisome proliferator-activated receptor alpha
Q07869
E3 ligase component 		BindingDB:BDBM21840 EC50 >10000 nM Low DOI: 10.1021/jm061299k
PMID: 17274610 		1
Peroxisome proliferator-activated receptor gamma
P37231
E3 ligase component 		BindingDB:BDBM21840 EC50 3650 nM Low DOI: 10.1021/jm061299k
PMID: 17274610 		1