< Back to small molecule database

4,4'-Difluorobenzil

E3L000537
Internal ID: BDB000537
Activity data available Local docking-ready structure
Dock with P00748
Structure
/e3_file/ligand_db/generated/BDB000537/BDB000537.sdf
Basic Properties
Compound ID
E3L000537
Internal ID
BDB000537
Molecular formula
C14H8F2O2
Molecular weight
246.212000
Exact mass
246.049236
XLogP
3.0304
TPSA
34.1400
HBA / HBD
2 / 0
Rotatable bonds
3
Heavy atoms / rings
18 / 2
Activity summary
Ki unknown 167.00000000 nM
1 activity record(s) imported
InChIKey
BRKULQOUSCHDGS-UHFFFAOYSA-N
SMILES
O=C(C(=O)c1ccc(F)cc1)c1ccc(F)cc1
Aliases
BDBM22730 (preferred) 4,4'-Difluorobenzil (source_name) BDBM22730 (source_id)
E3 Relation
E3 UniProt Gene / protein Relation type Ligand role Direct Functional Docking Source Evidence
P00748 F12
Coagulation factor XII
reported_binder bindingdb_reported Yes No low BindingDB:BDBM22730 medium
; target=Coagulation factor XII
Sources and Literature
Source Source ID Source URL Download URL DOI / PMID
BindingDB BDBM22730 Open - 10.1021/jm049011j PMID: 15828829
PubChem CID123072 Open -
Structure Files
Kind Format Status Docking use File / link Preparation note
canonical_2d SMILES raw Docking-ready O=C(C(=O)c1ccc(F)cc1)c1ccc(F)cc1 keep_bindingdb_unique
generated_3d SDF prepared Docking-ready public/e3_file/ligand_db/generated/BDB000537/BDB000537.sdf Generated from canonical SMILES
generated_3d MOL2 prepared Docking-ready public/e3_file/ligand_db/generated/BDB000537/BDB000537.mol2 Generated from canonical SMILES
docking_ready PDBQT prepared Docking-ready public/e3_file/ligand_db/generated/BDB000537/BDB000537.pdbqt Generated from canonical SMILES
image PNG prepared Reference public/e3_file/ligand_db/generated/BDB000537/BDB000537.png Generated from canonical SMILES
image SVG prepared Reference public/e3_file/ligand_db/generated/BDB000537/BDB000537.svg Generated from canonical SMILES
Activity
Target Source Assay Result Potency Literature Records
Coagulation factor XII
P00748
E3 ligase component
BindingDB:BDBM22730 Ki 167 nM Moderate DOI: 10.1021/jm049011j
PMID: 15828829
1