< Back to small molecule database

BDBM22799

E3L000606
Internal ID: BDB000606
Activity data available Local docking-ready structure
Dock with P00748
Structure
/e3_file/ligand_db/generated/BDB000606/BDB000606.sdf
Basic Properties
Compound ID
E3L000606
Internal ID
BDB000606
Molecular formula
C17H16N2O2
Molecular weight
280.327000
Exact mass
280.121178
XLogP
2.8479
TPSA
49.4100
HBA / HBD
3 / 1
Rotatable bonds
4
Heavy atoms / rings
21 / 3
Activity summary
Ki unknown 410.00000000 nM
1 activity record(s) imported
InChIKey
RSHQIUJQSSPXSC-UHFFFAOYSA-N
SMILES
CCc1ccc(NCN2C(=O)C(=O)c3ccccc32)cc1
Aliases
BDBM22799 (preferred) 1-{[(4-ethylphenyl)amino]methyl}-2,3-dihydro-1H-indole-2,3-dione (source_name) BDBM22799 (source_id)
E3 Relation
E3 UniProt Gene / protein Relation type Ligand role Direct Functional Docking Source Evidence
P00748 F12
Coagulation factor XII
reported_binder bindingdb_reported Yes No low BindingDB:BDBM22799 medium
; target=Coagulation factor XII
Sources and Literature
Source Source ID Source URL Download URL DOI / PMID
BindingDB BDBM22799 Open - 10.1021/jm061471k PMID: 17378546
PubChem CID2731733 Open -
Structure Files
Kind Format Status Docking use File / link Preparation note
canonical_2d SMILES raw Docking-ready CCc1ccc(NCN2C(=O)C(=O)c3ccccc32)cc1 keep_bindingdb_unique
generated_3d SDF prepared Docking-ready public/e3_file/ligand_db/generated/BDB000606/BDB000606.sdf Generated from canonical SMILES
generated_3d MOL2 prepared Docking-ready public/e3_file/ligand_db/generated/BDB000606/BDB000606.mol2 Generated from canonical SMILES
docking_ready PDBQT prepared Docking-ready public/e3_file/ligand_db/generated/BDB000606/BDB000606.pdbqt Generated from canonical SMILES
image PNG prepared Reference public/e3_file/ligand_db/generated/BDB000606/BDB000606.png Generated from canonical SMILES
image SVG prepared Reference public/e3_file/ligand_db/generated/BDB000606/BDB000606.svg Generated from canonical SMILES
Activity
Target Source Assay Result Potency Literature Records
Coagulation factor XII
P00748
E3 ligase component
BindingDB:BDBM22799 Ki 410 nM Moderate DOI: 10.1021/jm061471k
PMID: 17378546
1