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BDBM23541

E3L000678
Internal ID: BDB000678
Activity data available Local docking-ready structure
Dock with P00748
Structure
/e3_file/ligand_db/generated/BDB000678/BDB000678.sdf
Basic Properties
Compound ID
E3L000678
Internal ID
BDB000678
Molecular formula
C22H17NO3
Molecular weight
343.382000
Exact mass
343.120843
XLogP
4.1846
TPSA
59.3100
HBA / HBD
3 / 1
Rotatable bonds
3
Heavy atoms / rings
26 / 4
Activity summary
IC50 unknown 15000.00000000 nM
1 activity record(s) imported
InChIKey
AVGJZESYBKYYGZ-UHFFFAOYSA-N
SMILES
Cc1ccc2oc(=O)c(C(=O)NCc3cccc4ccccc34)cc2c1
Aliases
BDBM23541 (preferred) 6-methyl-N-(naphthalen-1-ylmethyl)-2-oxo-2H-chromene-3-carboxamide (source_name) BDBM23541 (source_id)
E3 Relation
E3 UniProt Gene / protein Relation type Ligand role Direct Functional Docking Source Evidence
P00748 F12
Coagulation factor XII		 reported_binder bindingdb_reported Yes No low BindingDB:BDBM23541 medium
; target=Coagulation factor XII
Sources and Literature
Source Source ID Source URL Download URL DOI / PMID
BindingDB BDBM23541 Open - 10.1021/jm8002697 PMID: 18459730
PubChem CID24860438 Open -
Structure Files
Kind Format Status Docking use File / link Preparation note
canonical_2d SMILES raw Docking-ready Cc1ccc2oc(=O)c(C(=O)NCc3cccc4ccccc34)cc2c1 keep_bindingdb_unique
generated_3d SDF prepared Docking-ready public/e3_file/ligand_db/generated/BDB000678/BDB000678.sdf Generated from canonical SMILES
generated_3d MOL2 prepared Docking-ready public/e3_file/ligand_db/generated/BDB000678/BDB000678.mol2 Generated from canonical SMILES
docking_ready PDBQT prepared Docking-ready public/e3_file/ligand_db/generated/BDB000678/BDB000678.pdbqt Generated from canonical SMILES
image PNG prepared Reference public/e3_file/ligand_db/generated/BDB000678/BDB000678.png Generated from canonical SMILES
image SVG prepared Reference public/e3_file/ligand_db/generated/BDB000678/BDB000678.svg Generated from canonical SMILES
Activity
Target Source Assay Result Potency Literature Records
Coagulation factor XII
P00748
E3 ligase component 		BindingDB:BDBM23541 IC50 15000 nM Low DOI: 10.1021/jm8002697
PMID: 18459730 		1