< Back to small molecule database

BDBM24714

E3L000741
Internal ID: BDB000741
Activity data available Local docking-ready structure
Dock with O14965
Structure
/e3_file/ligand_db/generated/BDB000741/BDB000741.sdf
Basic Properties
Compound ID
E3L000741
Internal ID
BDB000741
Molecular formula
C14H13N3
Molecular weight
223.279000
Exact mass
223.110947
XLogP
2.9650
TPSA
44.4700
HBA / HBD
1 / 2
Rotatable bonds
0
Heavy atoms / rings
17 / 4
Activity summary
IC50 unknown 51.00000000 nM
1 activity record(s) imported
InChIKey
HIJHIBWSHVXXGO-UHFFFAOYSA-N
SMILES
Cc1[nH]nc2c1CCc1c-2[nH]c2ccccc12
Aliases
BDBM24714 (preferred) 5-Methyl-3,4,16-triazatetracyclo[7.7.0.0^{2,6}.0^{10,15}]hexadeca-1(9),2,5,10,12,14-hexaene (source_name) BDBM24714 (source_id)
E3 Relation
E3 UniProt Gene / protein Relation type Ligand role Direct Functional Docking Source Evidence
O14965 AURKA;AIK;AIRK1;ARK1;AURA;AYK1;BTAK;IAK1;STK15;STK6
Aurora kinase A
reported_binder bindingdb_reported Yes No low BindingDB:BDBM24714 medium
; target=Aurora kinase A
Sources and Literature
Source Source ID Source URL Download URL DOI / PMID
BindingDB BDBM24714 Open - 10.1021/jm800052b PMID: 18630890
PubChem CID135929094 Open -
Structure Files
Kind Format Status Docking use File / link Preparation note
canonical_2d SMILES raw Docking-ready Cc1[nH]nc2c1CCc1c-2[nH]c2ccccc12 keep_bindingdb_unique
generated_3d SDF prepared Docking-ready public/e3_file/ligand_db/generated/BDB000741/BDB000741.sdf Generated from canonical SMILES
generated_3d MOL2 prepared Docking-ready public/e3_file/ligand_db/generated/BDB000741/BDB000741.mol2 Generated from canonical SMILES
docking_ready PDBQT prepared Docking-ready public/e3_file/ligand_db/generated/BDB000741/BDB000741.pdbqt Generated from canonical SMILES
image PNG prepared Reference public/e3_file/ligand_db/generated/BDB000741/BDB000741.png Generated from canonical SMILES
image SVG prepared Reference public/e3_file/ligand_db/generated/BDB000741/BDB000741.svg Generated from canonical SMILES
Activity
Target Source Assay Result Potency Literature Records
Aurora kinase A
O14965
E3 ligase component
BindingDB:BDBM24714 IC50 51 nM High DOI: 10.1021/jm800052b
PMID: 18630890
1