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BDBM27118

E3L000952
Internal ID: BDB000952
Activity data available Local docking-ready structure
Dock with P09874
Structure
/e3_file/ligand_db/generated/BDB000952/BDB000952.sdf
Basic Properties
Compound ID
E3L000952
Internal ID
BDB000952
Molecular formula
C14H18N4O
Molecular weight
258.325000
Exact mass
258.148061
XLogP
1.4710
TPSA
75.0100
HBA / HBD
3 / 2
Rotatable bonds
2
Heavy atoms / rings
19 / 3
Activity summary
Ki unknown 19.00000000 nM
1 activity record(s) imported
InChIKey
VKTKGDGXDJHDEC-UHFFFAOYSA-N
SMILES
CN1CCC(c2nc3cccc(C(N)=O)c3[nH]2)CC1
Aliases
BDBM27118 (preferred) 2-(1-methylpiperidin-4-yl)-1H-1,3-benzodiazole-4-carboxamide (source_name) BDBM27118 (source_id)
E3 Relation
E3 UniProt Gene / protein Relation type Ligand role Direct Functional Docking Source Evidence
P09874 PARP1;ADPRT;PPOL
Poly [ADP-ribose] polymerase 1		 reported_binder bindingdb_reported Yes No low BindingDB:BDBM27118 medium
; target=Poly [ADP-ribose] polymerase 1
Sources and Literature
Source Source ID Source URL Download URL DOI / PMID
BindingDB BDBM27118 Open - 10.1016/j.bmc.2008.05.044 PMID: 18541433
PubChem CID18428218 Open -
Structure Files
Kind Format Status Docking use File / link Preparation note
canonical_2d SMILES raw Docking-ready CN1CCC(c2nc3cccc(C(N)=O)c3[nH]2)CC1 keep_bindingdb_unique
generated_3d SDF prepared Docking-ready public/e3_file/ligand_db/generated/BDB000952/BDB000952.sdf Generated from canonical SMILES
generated_3d MOL2 prepared Docking-ready public/e3_file/ligand_db/generated/BDB000952/BDB000952.mol2 Generated from canonical SMILES
docking_ready PDBQT prepared Docking-ready public/e3_file/ligand_db/generated/BDB000952/BDB000952.pdbqt Generated from canonical SMILES
image PNG prepared Reference public/e3_file/ligand_db/generated/BDB000952/BDB000952.png Generated from canonical SMILES
image SVG prepared Reference public/e3_file/ligand_db/generated/BDB000952/BDB000952.svg Generated from canonical SMILES
Activity
Target Source Assay Result Potency Literature Records
Poly [ADP-ribose] polymerase 1
P09874
E3 ligase component 		BindingDB:BDBM27118 Ki 19 nM High DOI: 10.1016/j.bmc.2008.05.044
PMID: 18541433 		1