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BDBM27675

E3L001092
Internal ID: BDB001092
Activity data available Local docking-ready structure
Dock with P09874
Structure
/e3_file/ligand_db/generated/BDB001092/BDB001092.sdf
Basic Properties
Compound ID
E3L001092
Internal ID
BDB001092
Molecular formula
C19H19F2N3O3
Molecular weight
375.375000
Exact mass
375.139448
XLogP
1.6881
TPSA
84.6600
HBA / HBD
4 / 2
Rotatable bonds
5
Heavy atoms / rings
27 / 3
Activity summary
IC50 unknown 29.00000000 nM
1 activity record(s) imported
InChIKey
DVUDJUWSKVOVGY-UHFFFAOYSA-N
SMILES
NC(=O)c1cc(F)ccc1OCc1ccc(F)c(C(=O)N2CCNCC2)c1
Aliases
BDBM27675 (preferred) 5-Fluoro-2-{[4-fluoro-3-(piperazin-1-ylcarbonyl)phenyl]methoxy}benzamide (source_name) BDBM27675 (source_id)
E3 Relation
E3 UniProt Gene / protein Relation type Ligand role Direct Functional Docking Source Evidence
P09874 PARP1;ADPRT;PPOL
Poly [ADP-ribose] polymerase 1		 reported_binder bindingdb_reported Yes No low BindingDB:BDBM27675 medium
; target=Poly [ADP-ribose] polymerase 1
Sources and Literature
Source Source ID Source URL Download URL DOI / PMID
BindingDB BDBM27675 Open - 10.1016/j.bmcl.2008.06.025 PMID: 18579376
PubChem CID25218495 Open -
Structure Files
Kind Format Status Docking use File / link Preparation note
canonical_2d SMILES raw Docking-ready NC(=O)c1cc(F)ccc1OCc1ccc(F)c(C(=O)N2CCNCC2)c1 keep_bindingdb_unique
generated_3d SDF prepared Docking-ready public/e3_file/ligand_db/generated/BDB001092/BDB001092.sdf Generated from canonical SMILES
generated_3d MOL2 prepared Docking-ready public/e3_file/ligand_db/generated/BDB001092/BDB001092.mol2 Generated from canonical SMILES
docking_ready PDBQT prepared Docking-ready public/e3_file/ligand_db/generated/BDB001092/BDB001092.pdbqt Generated from canonical SMILES
image PNG prepared Reference public/e3_file/ligand_db/generated/BDB001092/BDB001092.png Generated from canonical SMILES
image SVG prepared Reference public/e3_file/ligand_db/generated/BDB001092/BDB001092.svg Generated from canonical SMILES
Activity
Target Source Assay Result Potency Literature Records
Poly [ADP-ribose] polymerase 1
P09874
E3 ligase component 		BindingDB:BDBM27675 IC50 29 nM High DOI: 10.1016/j.bmcl.2008.06.025
PMID: 18579376 		1