< Back to small molecule database

BDBM31072

E3L001323
Internal ID: BDB001323
Activity data available Local docking-ready structure
Dock with Q09472
Structure
/e3_file/ligand_db/generated/BDB001323/BDB001323.sdf
Basic Properties
Compound ID
E3L001323
Internal ID
BDB001323
Molecular formula
C16H10N2O3S2
Molecular weight
342.401000
Exact mass
342.013284
XLogP
3.6146
TPSA
73.0600
HBA / HBD
6 / 0
Rotatable bonds
3
Heavy atoms / rings
23 / 4
Activity summary
IC50 unknown 11000.00000000 nM
1 activity record(s) imported
InChIKey
RGXPNQXTNFLPRE-UHFFFAOYSA-N
SMILES
O=S1(=O)C=C(Sc2nnc(-c3ccccc3)o2)c2ccccc21
Aliases
BDBM31072 (preferred) 1,1-Dioxido-1-benzothien-3-yl 5-phenyl-1,3,4-oxadiazol-2-yl sulfide (source_name) BDBM31072 (source_id)
E3 Relation
E3 UniProt Gene / protein Relation type Ligand role Direct Functional Docking Source Evidence
Q09472 EP300;P300
Histone acetyltransferase p300		 reported_binder bindingdb_reported Yes No low BindingDB:BDBM31072 medium
; target=Histone acetyltransferase p300
Sources and Literature
Source Source ID Source URL Download URL DOI / PMID
BindingDB BDBM31072 Open - 10.1021/jm5019093 PMID: 25634295
PubChem CID890649 Open -
Structure Files
Kind Format Status Docking use File / link Preparation note
canonical_2d SMILES raw Docking-ready O=S1(=O)C=C(Sc2nnc(-c3ccccc3)o2)c2ccccc21 keep_bindingdb_unique
generated_3d SDF prepared Docking-ready public/e3_file/ligand_db/generated/BDB001323/BDB001323.sdf Generated from canonical SMILES
generated_3d MOL2 prepared Docking-ready public/e3_file/ligand_db/generated/BDB001323/BDB001323.mol2 Generated from canonical SMILES
docking_ready PDBQT prepared Docking-ready public/e3_file/ligand_db/generated/BDB001323/BDB001323.pdbqt Generated from canonical SMILES
image PNG prepared Reference public/e3_file/ligand_db/generated/BDB001323/BDB001323.png Generated from canonical SMILES
image SVG prepared Reference public/e3_file/ligand_db/generated/BDB001323/BDB001323.svg Generated from canonical SMILES
Activity
Target Source Assay Result Potency Literature Records
Histone acetyltransferase p300
Q09472
E3 ligase component 		BindingDB:BDBM31072 IC50 11000 nM Low DOI: 10.1021/jm5019093
PMID: 25634295 		1