< Back to small molecule database

2-phenoxybenzoyltryptophan derivative, R2C1

E3L001343
Internal ID: BDB001343
Activity data available Local docking-ready structure
Dock with Q00987
Structure
/e3_file/ligand_db/generated/BDB001343/BDB001343.sdf
Basic Properties
Compound ID
E3L001343
Internal ID
BDB001343
Molecular formula
C24H19ClN2O4
Molecular weight
434.879000
Exact mass
434.103335
XLogP
5.0393
TPSA
91.4200
HBA / HBD
3 / 3
Rotatable bonds
7
Heavy atoms / rings
31 / 4
Activity summary
Ki unknown 6000.00000000 nM
1 activity record(s) imported
InChIKey
LZLFTWKFCUCQAY-NRFANRHFSA-N
SMILES
O=C(N[C@@H](Cc1c[nH]c2cc(Cl)ccc12)C(=O)O)c1ccccc1Oc1ccccc1
Aliases
BDBM31211 (preferred) 2-phenoxybenzoyltryptophan derivative, R2C1 (source_name) BDBM31211 (source_id)
E3 Relation
E3 UniProt Gene / protein Relation type Ligand role Direct Functional Docking Source Evidence
Q00987 MDM2
E3 ubiquitin-protein ligase Mdm2
reported_binder bindingdb_reported Yes No low BindingDB:BDBM31211 medium
; target=E3 ubiquitin-protein ligase Mdm2
Sources and Literature
Source Source ID Source URL Download URL DOI / PMID
BindingDB BDBM31211 Open - 10.1016/j.ab.2004.03.009 PMID: 15246006
PubChem CID44176146 Open -
Structure Files
Kind Format Status Docking use File / link Preparation note
canonical_2d SMILES raw Docking-ready O=C(N[C@@H](Cc1c[nH]c2cc(Cl)ccc12)C(=O)O)c1ccccc1Oc1ccccc1 keep_bindingdb_unique
generated_3d SDF prepared Docking-ready public/e3_file/ligand_db/generated/BDB001343/BDB001343.sdf Generated from canonical SMILES
generated_3d MOL2 prepared Docking-ready public/e3_file/ligand_db/generated/BDB001343/BDB001343.mol2 Generated from canonical SMILES
docking_ready PDBQT prepared Docking-ready public/e3_file/ligand_db/generated/BDB001343/BDB001343.pdbqt Generated from canonical SMILES
image PNG prepared Reference public/e3_file/ligand_db/generated/BDB001343/BDB001343.png Generated from canonical SMILES
image SVG prepared Reference public/e3_file/ligand_db/generated/BDB001343/BDB001343.svg Generated from canonical SMILES
Activity
Target Source Assay Result Potency Literature Records
E3 ubiquitin-protein ligase Mdm2
Q00987
E3 ligase component
BindingDB:BDBM31211 Ki 6000 nM Low DOI: 10.1016/j.ab.2004.03.009
PMID: 15246006
1