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2-phenoxybenzoyltryptophan derivative, R5C2

E3L001356
Internal ID: BDB001356
Activity data available Local docking-ready structure
Dock with Q00987
Structure
/e3_file/ligand_db/generated/BDB001356/BDB001356.sdf
Basic Properties
Compound ID
E3L001356
Internal ID
BDB001356
Molecular formula
C33H34N2O5
Molecular weight
538.644000
Exact mass
538.246772
XLogP
6.7783
TPSA
97.6300
HBA / HBD
4 / 2
Rotatable bonds
10
Heavy atoms / rings
40 / 5
Activity summary
Ki unknown 200.00000000 nM
1 activity record(s) imported
InChIKey
XLDQLWPXGSTAGS-NDEPHWFRSA-N
SMILES
Cc1ccc2c(c1)c(C[C@H](NC(=O)c1ccccc1Oc1ccccc1)C(=O)O)cn2C(=O)CCC1CCCC1
Aliases
BDBM31224 (preferred) 2-phenoxybenzoyltryptophan derivative, R5C2 (source_name) BDBM31224 (source_id)
E3 Relation
E3 UniProt Gene / protein Relation type Ligand role Direct Functional Docking Source Evidence
Q00987 MDM2
E3 ubiquitin-protein ligase Mdm2		 reported_binder bindingdb_reported Yes No low BindingDB:BDBM31224 medium
; target=E3 ubiquitin-protein ligase Mdm2
Sources and Literature
Source Source ID Source URL Download URL DOI / PMID
BindingDB BDBM31224 Open - 10.1016/j.ab.2004.03.009 PMID: 15246006
PubChem CID44176159 Open -
Structure Files
Kind Format Status Docking use File / link Preparation note
canonical_2d SMILES raw Docking-ready Cc1ccc2c(c1)c(C[C@H](NC(=O)c1ccccc1Oc1ccccc1)C(=O)O)cn2C(=O)CCC1CCCC1 keep_bindingdb_unique
generated_3d SDF prepared Docking-ready public/e3_file/ligand_db/generated/BDB001356/BDB001356.sdf Generated from canonical SMILES
generated_3d MOL2 prepared Docking-ready public/e3_file/ligand_db/generated/BDB001356/BDB001356.mol2 Generated from canonical SMILES
docking_ready PDBQT prepared Docking-ready public/e3_file/ligand_db/generated/BDB001356/BDB001356.pdbqt Generated from canonical SMILES
image PNG prepared Reference public/e3_file/ligand_db/generated/BDB001356/BDB001356.png Generated from canonical SMILES
image SVG prepared Reference public/e3_file/ligand_db/generated/BDB001356/BDB001356.svg Generated from canonical SMILES
Activity
Target Source Assay Result Potency Literature Records
E3 ubiquitin-protein ligase Mdm2
Q00987
E3 ligase component 		BindingDB:BDBM31224 Ki 200 nM Moderate DOI: 10.1016/j.ab.2004.03.009
PMID: 15246006 		1