< Back to small molecule database

Chalcone derivative, C

E3L001408
Internal ID: BDB001408
Activity data available Local docking-ready structure
Dock with Q00987
Structure
/e3_file/ligand_db/generated/BDB001408/BDB001408.sdf
Basic Properties
Compound ID
E3L001408
Internal ID
BDB001408
Molecular formula
C19H17ClO4
Molecular weight
344.794000
Exact mass
344.081537
XLogP
4.4781
TPSA
63.6000
HBA / HBD
3 / 1
Rotatable bonds
6
Heavy atoms / rings
24 / 2
Activity summary
Kd unknown 244000.00000000 nM
2 activity record(s) imported
InChIKey
AICGQCAOHPDKQH-LFYBBSHMSA-N
SMILES
CC(C)(Oc1ccc(/C=C/C(=O)c2ccc(Cl)cc2)cc1)C(=O)O
Aliases
BDBM31276 (preferred) Chalcone derivative, C (source_name) BDBM31276 (source_id)
E3 Relation
E3 UniProt Gene / protein Relation type Ligand role Direct Functional Docking Source Evidence
Q00987 MDM2
E3 ubiquitin-protein ligase Mdm2
reported_binder bindingdb_reported Yes No low BindingDB:BDBM31276 medium
; target=E3 ubiquitin-protein ligase Mdm2
Sources and Literature
Source Source ID Source URL Download URL DOI / PMID
BindingDB BDBM31276 Open - 10.1021/bi000930v PMID: 11148027
PubChem CID14126638 Open -
Structure Files
Kind Format Status Docking use File / link Preparation note
canonical_2d SMILES raw Docking-ready CC(C)(Oc1ccc(/C=C/C(=O)c2ccc(Cl)cc2)cc1)C(=O)O keep_bindingdb_unique
generated_3d SDF prepared Docking-ready public/e3_file/ligand_db/generated/BDB001408/BDB001408.sdf Generated from canonical SMILES
generated_3d MOL2 prepared Docking-ready public/e3_file/ligand_db/generated/BDB001408/BDB001408.mol2 Generated from canonical SMILES
docking_ready PDBQT prepared Docking-ready public/e3_file/ligand_db/generated/BDB001408/BDB001408.pdbqt Generated from canonical SMILES
image PNG prepared Reference public/e3_file/ligand_db/generated/BDB001408/BDB001408.png Generated from canonical SMILES
image SVG prepared Reference public/e3_file/ligand_db/generated/BDB001408/BDB001408.svg Generated from canonical SMILES
Activity
Target Source Assay Result Potency Literature Records
E3 ubiquitin-protein ligase Mdm2
Q00987
E3 ligase component
BindingDB:BDBM31276 IC50 250000 nM Low DOI: 10.1021/bi000930v
PMID: 11148027
1
E3 ubiquitin-protein ligase Mdm2
Q00987
E3 ligase component
BindingDB:BDBM31276 Kd 244000 nM Low DOI: 10.1021/bi000930v
PMID: 11148027
1