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BDBM35059

E3L001894
Internal ID: BDB001894
Activity data available Local docking-ready structure
Dock with Q00987
Structure
/e3_file/ligand_db/generated/BDB001894/BDB001894.sdf
Basic Properties
Compound ID
E3L001894
Internal ID
BDB001894
Molecular formula
C47H75BrN10O9
Molecular weight
1004.082000
Exact mass
1002.490186
XLogP
4.9936
TPSA
295.8500
HBA / HBD
8 / 9
Rotatable bonds
34
Heavy atoms / rings
67 / 2
Activity summary
IC50 unknown 20000.00000000 nM
1 activity record(s) imported
InChIKey
GBDCVNXQCCJMDD-UHFFFAOYSA-N
SMILES
CC(C)CCCNC(=O)N(CC(CCC(=O)O)NC(N)=O)C(CCCCN)CN(C(=O)NCCCc1ccc(Br)cc1)C(CCC(=O)O)CN(CCC(N)=O)C(=O)NCCCc1ccccc1
Aliases
BDBM35059 (preferred) BDBM35059 (source_id)
E3 Relation
E3 UniProt Gene / protein Relation type Ligand role Direct Functional Docking Source Evidence
Q00987 MDM2
E3 ubiquitin-protein ligase Mdm2		 reported_binder bindingdb_reported Yes No low BindingDB:BDBM35059 medium
; target=E3 ubiquitin-protein ligase Mdm2
Sources and Literature
Source Source ID Source URL Download URL DOI / PMID
BindingDB BDBM35059 Open - 10.1016/j.bmc.2009.10.032 PMID: 19880322
Structure Files
Kind Format Status Docking use File / link Preparation note
canonical_2d SMILES raw Docking-ready CC(C)CCCNC(=O)N(CC(CCC(=O)O)NC(N)=O)C(CCCCN)CN(C(=O)NCCCc1ccc(Br)cc1)C(CCC(=O)O)CN(CCC(N)=O)C(=O)NCCCc1ccccc1 keep_bindingdb_unique
generated_3d SDF prepared Docking-ready public/e3_file/ligand_db/generated/BDB001894/BDB001894.sdf Generated from canonical SMILES
generated_3d MOL2 prepared Docking-ready public/e3_file/ligand_db/generated/BDB001894/BDB001894.mol2 Generated from canonical SMILES
docking_ready PDBQT prepared Docking-ready public/e3_file/ligand_db/generated/BDB001894/BDB001894.pdbqt Generated from canonical SMILES
image PNG prepared Reference public/e3_file/ligand_db/generated/BDB001894/BDB001894.png Generated from canonical SMILES
image SVG prepared Reference public/e3_file/ligand_db/generated/BDB001894/BDB001894.svg Generated from canonical SMILES
Activity
Target Source Assay Result Potency Literature Records
E3 ubiquitin-protein ligase Mdm2
Q00987
E3 ligase component 		BindingDB:BDBM35059 IC50 20000 nM Low DOI: 10.1016/j.bmc.2009.10.032
PMID: 19880322 		1