< Back to small molecule database

BDBM45650

E3L002780
Internal ID: BDB002780
Activity data available Local docking-ready structure
Dock with P00748
Structure
/e3_file/ligand_db/generated/BDB002780/BDB002780.sdf
Basic Properties
Compound ID
E3L002780
Internal ID
BDB002780
Molecular formula
C22H22FN5O4S2
Molecular weight
503.581000
Exact mass
503.109724
XLogP
2.0699
TPSA
103.3400
HBA / HBD
6 / 2
Rotatable bonds
6
Heavy atoms / rings
34 / 4
Activity summary
IC50 > 50000.00000000 nM
1 activity record(s) imported
InChIKey
REWYLEITUFMHNR-UHFFFAOYSA-N
SMILES
C=CCN1C(=O)C(=NNC(=S)Nc2ccccc2F)c2cc(S(=O)(=O)N3CCOCC3)ccc21
Aliases
BDBM45650 (preferred) BDBM45650 (source_id)
E3 Relation
E3 UniProt Gene / protein Relation type Ligand role Direct Functional Docking Source Evidence
P00748 F12
Coagulation factor XII
reported_binder bindingdb_reported Yes No low BindingDB:BDBM45650 medium
; target=Coagulation factor XII
Sources and Literature
Source Source ID Source URL Download URL DOI / PMID
BindingDB BDBM45650 Open - 10.7270/Q21G0JQS
Structure Files
Kind Format Status Docking use File / link Preparation note
canonical_2d SMILES raw Docking-ready C=CCN1C(=O)C(=NNC(=S)Nc2ccccc2F)c2cc(S(=O)(=O)N3CCOCC3)ccc21 keep_bindingdb_unique
generated_3d SDF prepared Docking-ready public/e3_file/ligand_db/generated/BDB002780/BDB002780.sdf Generated from canonical SMILES
generated_3d MOL2 prepared Docking-ready public/e3_file/ligand_db/generated/BDB002780/BDB002780.mol2 Generated from canonical SMILES
docking_ready PDBQT prepared Docking-ready public/e3_file/ligand_db/generated/BDB002780/BDB002780.pdbqt Generated from canonical SMILES
image PNG prepared Reference public/e3_file/ligand_db/generated/BDB002780/BDB002780.png Generated from canonical SMILES
image SVG prepared Reference public/e3_file/ligand_db/generated/BDB002780/BDB002780.svg Generated from canonical SMILES
Activity
Target Source Assay Result Potency Literature Records
Coagulation factor XII
P00748
E3 ligase component
BindingDB:BDBM45650 IC50 >50000 nM Low DOI: 10.7270/Q21G0JQS 1