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1-[(3-Bromoimidazo[1,2-a]pyridin-2-yl)methyl]pyridinium

E3L002831
Internal ID: BDB002831
Activity data available Local docking-ready structure
Dock with P00748
Structure
/e3_file/ligand_db/generated/BDB002831/BDB002831.sdf
Basic Properties
Compound ID
E3L002831
Internal ID
BDB002831
Molecular formula
C13H11BrN3+
Molecular weight
289.156000
Exact mass
288.013086
XLogP
2.4326
TPSA
21.1800
HBA / HBD
1 / 0
Rotatable bonds
2
Heavy atoms / rings
17 / 3
Activity summary
IC50 > 50000.00000000 nM
1 activity record(s) imported
InChIKey
SDCFSFHWBKMEQP-UHFFFAOYSA-N
SMILES
Brc1c(C[n+]2ccccc2)nc2ccccn12
Aliases
BDBM45701 (preferred) 1-[(3-Bromoimidazo[1,2-a]pyridin-2-yl)methyl]pyridinium (source_name) BDBM45701 (source_id)
E3 Relation
E3 UniProt Gene / protein Relation type Ligand role Direct Functional Docking Source Evidence
P00748 F12
Coagulation factor XII		 reported_binder bindingdb_reported Yes No low BindingDB:BDBM45701 medium
; target=Coagulation factor XII
Sources and Literature
Source Source ID Source URL Download URL DOI / PMID
BindingDB BDBM45701 Open - 10.7270/Q21G0JQS
PubChem CID915791 Open -
Structure Files
Kind Format Status Docking use File / link Preparation note
canonical_2d SMILES raw Docking-ready Brc1c(C[n+]2ccccc2)nc2ccccn12 keep_bindingdb_unique
generated_3d SDF prepared Docking-ready public/e3_file/ligand_db/generated/BDB002831/BDB002831.sdf Generated from canonical SMILES
generated_3d MOL2 prepared Docking-ready public/e3_file/ligand_db/generated/BDB002831/BDB002831.mol2 Generated from canonical SMILES
docking_ready PDBQT prepared Docking-ready public/e3_file/ligand_db/generated/BDB002831/BDB002831.pdbqt Generated from canonical SMILES
image PNG prepared Reference public/e3_file/ligand_db/generated/BDB002831/BDB002831.png Generated from canonical SMILES
image SVG prepared Reference public/e3_file/ligand_db/generated/BDB002831/BDB002831.svg Generated from canonical SMILES
Activity
Target Source Assay Result Potency Literature Records
Coagulation factor XII
P00748
E3 ligase component 		BindingDB:BDBM45701 IC50 >50000 nM Low DOI: 10.7270/Q21G0JQS 1