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2-(4-Phenylphenyl)pyrrolidino[1,2-a]imidazole

E3L002926
Internal ID: BDB002926
Activity data available Local docking-ready structure
Dock with P61964
Structure
/e3_file/ligand_db/generated/BDB002926/BDB002926.sdf
Basic Properties
Compound ID
E3L002926
Internal ID
BDB002926
Molecular formula
C18H16N2
Molecular weight
260.340000
Exact mass
260.131349
XLogP
4.1633
TPSA
17.8200
HBA / HBD
1 / 0
Rotatable bonds
2
Heavy atoms / rings
20 / 4
Activity summary
Ki unknown 8440.00000000 nM
1 activity record(s) imported
InChIKey
IMYNUXAXHXLXJE-UHFFFAOYSA-N
SMILES
c1ccc(-c2ccc(-c3cn4c(n3)CCC4)cc2)cc1
Aliases
BDBM49419 (preferred) 2-(4-Phenylphenyl)pyrrolidino[1,2-a]imidazole (source_name) BDBM49419 (source_id)
E3 Relation
E3 UniProt Gene / protein Relation type Ligand role Direct Functional Docking Source Evidence
P61964 WDR5;BIG3
WD repeat-containing protein 5		 reported_binder bindingdb_reported Yes No low BindingDB:BDBM49419 medium
; target=WD repeat-containing protein 5
Sources and Literature
Source Source ID Source URL Download URL DOI / PMID
BindingDB BDBM49419 Open - 10.1021/acs.jmedchem.8b00375 PMID: 29889518
PubChem CID3697667 Open -
Structure Files
Kind Format Status Docking use File / link Preparation note
canonical_2d SMILES raw Docking-ready c1ccc(-c2ccc(-c3cn4c(n3)CCC4)cc2)cc1 keep_bindingdb_unique
generated_3d SDF prepared Docking-ready public/e3_file/ligand_db/generated/BDB002926/BDB002926.sdf Generated from canonical SMILES
generated_3d MOL2 prepared Docking-ready public/e3_file/ligand_db/generated/BDB002926/BDB002926.mol2 Generated from canonical SMILES
docking_ready PDBQT prepared Docking-ready public/e3_file/ligand_db/generated/BDB002926/BDB002926.pdbqt Generated from canonical SMILES
image PNG prepared Reference public/e3_file/ligand_db/generated/BDB002926/BDB002926.png Generated from canonical SMILES
image SVG prepared Reference public/e3_file/ligand_db/generated/BDB002926/BDB002926.svg Generated from canonical SMILES
Activity
Target Source Assay Result Potency Literature Records
WD repeat-containing protein 5
P61964
E3 ligase component 		BindingDB:BDBM49419 Ki 8440 nM Low DOI: 10.1021/acs.jmedchem.8b00375
PMID: 29889518 		1