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US12486251, Example 35

E3L003321
Internal ID: BDB003321
Activity data available Local docking-ready structure
Dock with Q92793
Structure
/e3_file/ligand_db/generated/BDB003321/BDB003321.sdf
Basic Properties
Compound ID
E3L003321
Internal ID
BDB003321
Molecular formula
C26H25F2N5O2
Molecular weight
477.515000
Exact mass
477.197631
XLogP
4.4721
TPSA
83.2800
HBA / HBD
5 / 2
Rotatable bonds
6
Heavy atoms / rings
35 / 5
Activity summary
IC50 unknown 16.00000000 nM
1 activity record(s) imported
InChIKey
RDYPFBFOQINMCF-UHFFFAOYSA-N
SMILES
CNC(=O)c1cc2ccccc2c(N2CCCc3cc(-c4cnn(CCO)c4)c(C(F)F)cc32)n1
Aliases
BDBM70201 (preferred) US12486251, Example 35 (source_name) BDBM70201 (source_id)
E3 Relation
E3 UniProt Gene / protein Relation type Ligand role Direct Functional Docking Source Evidence
Q92793 CREBBP;CBP
CREB-binding protein		 reported_binder bindingdb_reported Yes No low BindingDB:BDBM70201 medium
; target=CREB-binding protein
Sources and Literature
Source Source ID Source URL Download URL DOI / PMID
BindingDB BDBM70201 Open - 10.1016/j.bmcl.2008.05.064
PubChem CID169842885 Open -
Structure Files
Kind Format Status Docking use File / link Preparation note
canonical_2d SMILES raw Docking-ready CNC(=O)c1cc2ccccc2c(N2CCCc3cc(-c4cnn(CCO)c4)c(C(F)F)cc32)n1 keep_bindingdb_unique
generated_3d SDF prepared Docking-ready public/e3_file/ligand_db/generated/BDB003321/BDB003321.sdf Generated from canonical SMILES
generated_3d MOL2 prepared Docking-ready public/e3_file/ligand_db/generated/BDB003321/BDB003321.mol2 Generated from canonical SMILES
docking_ready PDBQT prepared Docking-ready public/e3_file/ligand_db/generated/BDB003321/BDB003321.pdbqt Generated from canonical SMILES
image PNG prepared Reference public/e3_file/ligand_db/generated/BDB003321/BDB003321.png Generated from canonical SMILES
image SVG prepared Reference public/e3_file/ligand_db/generated/BDB003321/BDB003321.svg Generated from canonical SMILES
Activity
Target Source Assay Result Potency Literature Records
CREB-binding protein
Q92793
E3 ligase component 		BindingDB:BDBM70201 IC50 16 nM High DOI: 10.1016/j.bmcl.2008.05.064 1