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US12486251, Example 36

E3L003322
Internal ID: BDB003322
Activity data available Local docking-ready structure
Dock with Q92793
Structure
/e3_file/ligand_db/generated/BDB003322/BDB003322.sdf
Basic Properties
Compound ID
E3L003322
Internal ID
BDB003322
Molecular formula
C28H30F2N6O
Molecular weight
504.585000
Exact mass
504.244916
XLogP
5.0414
TPSA
66.2900
HBA / HBD
5 / 1
Rotatable bonds
7
Heavy atoms / rings
37 / 5
Activity summary
IC50 unknown 12.00000000 nM
1 activity record(s) imported
InChIKey
HXTWLQKEJBHPJS-UHFFFAOYSA-N
SMILES
CNC(=O)c1cc2ccccc2c(N2CCCc3cc(-c4cnn(CCN(C)C)c4)c(C(F)F)cc32)n1
Aliases
BDBM70202 (preferred) US12486251, Example 36 (source_name) BDBM70202 (source_id)
E3 Relation
E3 UniProt Gene / protein Relation type Ligand role Direct Functional Docking Source Evidence
Q92793 CREBBP;CBP
CREB-binding protein		 reported_binder bindingdb_reported Yes No low BindingDB:BDBM70202 medium
; target=CREB-binding protein
Sources and Literature
Source Source ID Source URL Download URL DOI / PMID
BindingDB BDBM70202 Open - 10.1016/j.bmcl.2008.05.064
PubChem CID169842632 Open -
Structure Files
Kind Format Status Docking use File / link Preparation note
canonical_2d SMILES raw Docking-ready CNC(=O)c1cc2ccccc2c(N2CCCc3cc(-c4cnn(CCN(C)C)c4)c(C(F)F)cc32)n1 keep_bindingdb_unique
generated_3d SDF prepared Docking-ready public/e3_file/ligand_db/generated/BDB003322/BDB003322.sdf Generated from canonical SMILES
generated_3d MOL2 prepared Docking-ready public/e3_file/ligand_db/generated/BDB003322/BDB003322.mol2 Generated from canonical SMILES
docking_ready PDBQT prepared Docking-ready public/e3_file/ligand_db/generated/BDB003322/BDB003322.pdbqt Generated from canonical SMILES
image PNG prepared Reference public/e3_file/ligand_db/generated/BDB003322/BDB003322.png Generated from canonical SMILES
image SVG prepared Reference public/e3_file/ligand_db/generated/BDB003322/BDB003322.svg Generated from canonical SMILES
Activity
Target Source Assay Result Potency Literature Records
CREB-binding protein
Q92793
E3 ligase component 		BindingDB:BDBM70202 IC50 12 nM High DOI: 10.1016/j.bmcl.2008.05.064 1