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US12486251, Example 43

E3L003329
Internal ID: BDB003329
Activity data available Local docking-ready structure
Dock with Q92793
Structure
/e3_file/ligand_db/generated/BDB003329/BDB003329.sdf
Basic Properties
Compound ID
E3L003329
Internal ID
BDB003329
Molecular formula
C27H27F2N5O2
Molecular weight
491.542000
Exact mass
491.213282
XLogP
4.6469
TPSA
78.4300
HBA / HBD
5 / 1
Rotatable bonds
4
Heavy atoms / rings
36 / 5
Activity summary
IC50 unknown 6.70000000 nM
1 activity record(s) imported
InChIKey
NRPPQKQKMFTRIE-UHFFFAOYSA-N
SMILES
CNC(=O)c1cc2cccnc2c(N2CCCc3cc(C4=CCN(C(C)=O)CC4)c(C(F)F)cc32)n1
Aliases
BDBM70209 (preferred) US12486251, Example 43 (source_name) BDBM70209 (source_id)
E3 Relation
E3 UniProt Gene / protein Relation type Ligand role Direct Functional Docking Source Evidence
Q92793 CREBBP;CBP
CREB-binding protein		 reported_binder bindingdb_reported Yes No low BindingDB:BDBM70209 medium
; target=CREB-binding protein
Sources and Literature
Source Source ID Source URL Download URL DOI / PMID
BindingDB BDBM70209 Open - 10.1016/j.bmcl.2008.05.064
PubChem CID166806615 Open -
Structure Files
Kind Format Status Docking use File / link Preparation note
canonical_2d SMILES raw Docking-ready CNC(=O)c1cc2cccnc2c(N2CCCc3cc(C4=CCN(C(C)=O)CC4)c(C(F)F)cc32)n1 keep_bindingdb_unique
generated_3d SDF prepared Docking-ready public/e3_file/ligand_db/generated/BDB003329/BDB003329.sdf Generated from canonical SMILES
generated_3d MOL2 prepared Docking-ready public/e3_file/ligand_db/generated/BDB003329/BDB003329.mol2 Generated from canonical SMILES
docking_ready PDBQT prepared Docking-ready public/e3_file/ligand_db/generated/BDB003329/BDB003329.pdbqt Generated from canonical SMILES
image PNG prepared Reference public/e3_file/ligand_db/generated/BDB003329/BDB003329.png Generated from canonical SMILES
image SVG prepared Reference public/e3_file/ligand_db/generated/BDB003329/BDB003329.svg Generated from canonical SMILES
Activity
Target Source Assay Result Potency Literature Records
CREB-binding protein
Q92793
E3 ligase component 		BindingDB:BDBM70209 IC50 6.7 nM Very high DOI: 10.1016/j.bmcl.2008.05.064 1