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BDBM79793

E3L003543
Internal ID: BDB003543
Activity data available Local docking-ready structure
Dock with P19474
Structure
/e3_file/ligand_db/generated/BDB003543/BDB003543.sdf
Basic Properties
Compound ID
E3L003543
Internal ID
BDB003543
Molecular formula
C23H28FNO3S2
Molecular weight
449.613000
Exact mass
449.149464
XLogP
5.2234
TPSA
54.4500
HBA / HBD
4 / 0
Rotatable bonds
6
Heavy atoms / rings
30 / 3
Activity summary
Kd unknown 550.00000000 nM
1 activity record(s) imported
InChIKey
PAFGSEZHUCSUMW-UHFFFAOYSA-N
SMILES
CSc1ccccc1-c1ccc(C(=O)N(C)CC2(F)CCCCC2)c(S(C)(=O)=O)c1
Aliases
BDBM79793 (preferred) N-[(1-fluorocyclohexyl)methyl]-N-methyl-4-(2-methylsulfanylphenyl)-2-methylsulfonylbenzamide (source_name) BDBM79793 (source_id)
E3 Relation
E3 UniProt Gene / protein Relation type Ligand role Direct Functional Docking Source Evidence
P19474 TRIM21;RNF81;RO52;SSA1
E3 ubiquitin-protein ligase TRIM21		 reported_binder bindingdb_reported Yes No low BindingDB:BDBM79793 medium
; target=E3 ubiquitin-protein ligase TRIM21
Sources and Literature
Source Source ID Source URL Download URL DOI / PMID
BindingDB BDBM79793 Open - 10.7270/Q2VT1XX9
PubChem CID172994619 Open -
Structure Files
Kind Format Status Docking use File / link Preparation note
canonical_2d SMILES raw Docking-ready CSc1ccccc1-c1ccc(C(=O)N(C)CC2(F)CCCCC2)c(S(C)(=O)=O)c1 keep_bindingdb_unique
generated_3d SDF prepared Docking-ready public/e3_file/ligand_db/generated/BDB003543/BDB003543.sdf Generated from canonical SMILES
generated_3d MOL2 prepared Docking-ready public/e3_file/ligand_db/generated/BDB003543/BDB003543.mol2 Generated from canonical SMILES
docking_ready PDBQT prepared Docking-ready public/e3_file/ligand_db/generated/BDB003543/BDB003543.pdbqt Generated from canonical SMILES
image PNG prepared Reference public/e3_file/ligand_db/generated/BDB003543/BDB003543.png Generated from canonical SMILES
image SVG prepared Reference public/e3_file/ligand_db/generated/BDB003543/BDB003543.svg Generated from canonical SMILES
Activity
Target Source Assay Result Potency Literature Records
E3 ubiquitin-protein ligase TRIM21
P19474
E3 ligase component 		BindingDB:BDBM79793 Kd 550 nM Moderate DOI: 10.7270/Q2VT1XX9 1