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BDBM79861

E3L003593
Internal ID: BDB003593
Activity data available Local docking-ready structure
Dock with P19474
Structure
/e3_file/ligand_db/generated/BDB003593/BDB003593.sdf
Basic Properties
Compound ID
E3L003593
Internal ID
BDB003593
Molecular formula
C22H21FN2O4S2
Molecular weight
460.552000
Exact mass
460.092677
XLogP
3.5786
TPSA
87.3100
HBA / HBD
5 / 1
Rotatable bonds
6
Heavy atoms / rings
31 / 3
Activity summary
Kd < 10.00000000 nM
1 activity record(s) imported
InChIKey
XRHYOWJRSOGGGC-UHFFFAOYSA-N
SMILES
CSc1cc(F)ccc1-c1ccc(C(=O)N(C)Cc2cc[nH]c(=O)c2)c(S(C)(=O)=O)c1
Aliases
BDBM79861 (preferred) 4-(4-fluoro-2-methylsulfanylphenyl)-N-methyl-2-methylsulfonyl-N-[(2-oxo-1H-pyridin-4-yl)methyl]benzamide (source_name) BDBM79861 (source_id)
E3 Relation
E3 UniProt Gene / protein Relation type Ligand role Direct Functional Docking Source Evidence
P19474 TRIM21;RNF81;RO52;SSA1
E3 ubiquitin-protein ligase TRIM21		 reported_binder bindingdb_reported Yes No low BindingDB:BDBM79861 medium
; target=E3 ubiquitin-protein ligase TRIM21
Sources and Literature
Source Source ID Source URL Download URL DOI / PMID
BindingDB BDBM79861 Open - 10.7270/Q2VT1XX9
PubChem CID178289584 Open -
Structure Files
Kind Format Status Docking use File / link Preparation note
canonical_2d SMILES raw Docking-ready CSc1cc(F)ccc1-c1ccc(C(=O)N(C)Cc2cc[nH]c(=O)c2)c(S(C)(=O)=O)c1 keep_bindingdb_unique
generated_3d SDF prepared Docking-ready public/e3_file/ligand_db/generated/BDB003593/BDB003593.sdf Generated from canonical SMILES
generated_3d MOL2 prepared Docking-ready public/e3_file/ligand_db/generated/BDB003593/BDB003593.mol2 Generated from canonical SMILES
docking_ready PDBQT prepared Docking-ready public/e3_file/ligand_db/generated/BDB003593/BDB003593.pdbqt Generated from canonical SMILES
image PNG prepared Reference public/e3_file/ligand_db/generated/BDB003593/BDB003593.png Generated from canonical SMILES
image SVG prepared Reference public/e3_file/ligand_db/generated/BDB003593/BDB003593.svg Generated from canonical SMILES
Activity
Target Source Assay Result Potency Literature Records
E3 ubiquitin-protein ligase TRIM21
P19474
E3 ligase component 		BindingDB:BDBM79861 Kd <10 nM Very high DOI: 10.7270/Q2VT1XX9 1