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US20250388593, Example 173

E3L003949
Internal ID: BDB003949
Activity data available Local docking-ready structure
Dock with Q96SW2
Structure
/e3_file/ligand_db/generated/BDB003949/BDB003949.sdf
Basic Properties
Compound ID
E3L003949
Internal ID
BDB003949
Molecular formula
C12H10BrNO3
Molecular weight
296.120000
Exact mass
294.984405
XLogP
1.4798
TPSA
55.4000
HBA / HBD
3 / 1
Rotatable bonds
1
Heavy atoms / rings
17 / 3
Activity summary
Kd > 100000.00000000 nM
1 activity record(s) imported
InChIKey
RZLABNKXNMPBIF-UHFFFAOYSA-N
SMILES
O=C1NC(=O)C2(c3ccc(Br)cc3)CCC1O2
Aliases
BDBM88608 (preferred) US20250388593, Example 173 (source_name) BDBM88608 (source_id)
E3 Relation
E3 UniProt Gene / protein Relation type Ligand role Direct Functional Docking Source Evidence
Q96SW2 CRBN;AD-006
Protein cereblon
reported_binder bindingdb_reported Yes No low BindingDB:BDBM88608 medium
; target=Protein cereblon
Sources and Literature
Source Source ID Source URL Download URL DOI / PMID
BindingDB BDBM88608 Open - 10.7270/Q2TX3M56
PubChem CID171843994 Open -
Structure Files
Kind Format Status Docking use File / link Preparation note
canonical_2d SMILES raw Docking-ready O=C1NC(=O)C2(c3ccc(Br)cc3)CCC1O2 keep_bindingdb_unique
generated_3d SDF prepared Docking-ready public/e3_file/ligand_db/generated/BDB003949/BDB003949.sdf Generated from canonical SMILES
generated_3d MOL2 prepared Docking-ready public/e3_file/ligand_db/generated/BDB003949/BDB003949.mol2 Generated from canonical SMILES
docking_ready PDBQT prepared Docking-ready public/e3_file/ligand_db/generated/BDB003949/BDB003949.pdbqt Generated from canonical SMILES
image PNG prepared Reference public/e3_file/ligand_db/generated/BDB003949/BDB003949.png Generated from canonical SMILES
image SVG prepared Reference public/e3_file/ligand_db/generated/BDB003949/BDB003949.svg Generated from canonical SMILES
Activity
Target Source Assay Result Potency Literature Records
Protein cereblon
Q96SW2
E3 ligase component
BindingDB:BDBM88608 Kd >100000 nM Low DOI: 10.7270/Q2TX3M56 1