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4,4'-(Pyrimidine-2,4-diyldiimino)dibenzoic acid

E3L004021
Internal ID: BDB004021
Activity data available Local docking-ready structure
Dock with O14965
Structure
/e3_file/ligand_db/generated/BDB004021/BDB004021.sdf
Basic Properties
Compound ID
E3L004021
Internal ID
BDB004021
Molecular formula
C18H14N4O4
Molecular weight
350.334000
Exact mass
350.101505
XLogP
3.3602
TPSA
124.4400
HBA / HBD
6 / 4
Rotatable bonds
6
Heavy atoms / rings
26 / 3
Activity summary
IC50 unknown 256.00000000 nM
2 activity record(s) imported
InChIKey
PZRUXYWYONKHDD-UHFFFAOYSA-N
SMILES
O=C(O)c1ccc(Nc2ccnc(Nc3ccc(C(=O)O)cc3)n2)cc1
Aliases
BDBM92795 (preferred) 4,4'-(Pyrimidine-2,4-diyldiimino)dibenzoic acid (source_name) BDBM92795 (source_id)
E3 Relation
E3 UniProt Gene / protein Relation type Ligand role Direct Functional Docking Source Evidence
O14965 AURKA;AIK;AIRK1;ARK1;AURA;AYK1;BTAK;IAK1;STK15;STK6
Aurora kinase A		 reported_binder bindingdb_reported Yes No low BindingDB:BDBM92795 medium
; target=Aurora kinase A
Sources and Literature
Source Source ID Source URL Download URL DOI / PMID
BindingDB BDBM92795 Open - 10.1021/jm300334d; 10.7270/Q2J1020R PMID: 22803810
PubChem CID779302 Open -
Structure Files
Kind Format Status Docking use File / link Preparation note
canonical_2d SMILES raw Docking-ready O=C(O)c1ccc(Nc2ccnc(Nc3ccc(C(=O)O)cc3)n2)cc1 keep_bindingdb_unique
generated_3d SDF prepared Docking-ready public/e3_file/ligand_db/generated/BDB004021/BDB004021.sdf Generated from canonical SMILES
generated_3d MOL2 prepared Docking-ready public/e3_file/ligand_db/generated/BDB004021/BDB004021.mol2 Generated from canonical SMILES
docking_ready PDBQT prepared Docking-ready public/e3_file/ligand_db/generated/BDB004021/BDB004021.pdbqt Generated from canonical SMILES
image PNG prepared Reference public/e3_file/ligand_db/generated/BDB004021/BDB004021.png Generated from canonical SMILES
image SVG prepared Reference public/e3_file/ligand_db/generated/BDB004021/BDB004021.svg Generated from canonical SMILES
Activity
Target Source Assay Result Potency Literature Records
Aurora kinase A
O14965
E3 ligase component 		BindingDB:BDBM92795 IC50 256 nM Moderate DOI: 10.1021/jm300334d
PMID: 22803810 		1
Aurora kinase A
O14965
E3 ligase component 		BindingDB:BDBM92795 IC50 256 nM Moderate DOI: 10.7270/Q2J1020R 1