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BDBM97572

E3L004373
Internal ID: BDB004373
Activity data available Local docking-ready structure
Dock with P09874
Structure
/e3_file/ligand_db/generated/BDB004373/BDB004373.sdf
Basic Properties
Compound ID
E3L004373
Internal ID
BDB004373
Molecular formula
C21H21N3O3
Molecular weight
363.417000
Exact mass
363.158292
XLogP
3.0889
TPSA
87.2400
HBA / HBD
5 / 3
Rotatable bonds
3
Heavy atoms / rings
27 / 5
Activity summary
IC50 unknown 30.00000000 nM
1 activity record(s) imported
InChIKey
FWHQMCOYZBRPKV-HDJSIYSDSA-N
SMILES
O=c1[nH]nc2c3c(cccc13)Oc1ccc(CN[C@H]3CC[C@H](O)CC3)cc1-2
Aliases
BDBM97572 (preferred) BDBM97572 (source_id)
E3 Relation
E3 UniProt Gene / protein Relation type Ligand role Direct Functional Docking Source Evidence
P09874 PARP1;ADPRT;PPOL
Poly [ADP-ribose] polymerase 1
reported_binder bindingdb_reported Yes No low BindingDB:BDBM97572 medium
; target=Poly [ADP-ribose] polymerase 1
Sources and Literature
Source Source ID Source URL Download URL DOI / PMID
BindingDB BDBM97572 Open - 10.7270/Q2DJ5D89
Structure Files
Kind Format Status Docking use File / link Preparation note
canonical_2d SMILES raw Docking-ready O=c1[nH]nc2c3c(cccc13)Oc1ccc(CN[C@H]3CC[C@H](O)CC3)cc1-2 keep_bindingdb_unique
generated_3d SDF prepared Docking-ready public/e3_file/ligand_db/generated/BDB004373/BDB004373.sdf Generated from canonical SMILES
generated_3d MOL2 prepared Docking-ready public/e3_file/ligand_db/generated/BDB004373/BDB004373.mol2 Generated from canonical SMILES
docking_ready PDBQT prepared Docking-ready public/e3_file/ligand_db/generated/BDB004373/BDB004373.pdbqt Generated from canonical SMILES
image PNG prepared Reference public/e3_file/ligand_db/generated/BDB004373/BDB004373.png Generated from canonical SMILES
image SVG prepared Reference public/e3_file/ligand_db/generated/BDB004373/BDB004373.svg Generated from canonical SMILES
Activity
Target Source Assay Result Potency Literature Records
Poly [ADP-ribose] polymerase 1
P09874
E3 ligase component
BindingDB:BDBM97572 IC50 30 nM High DOI: 10.7270/Q2DJ5D89 1