< Back to small molecule database

BDBM119744

E3L005200
Internal ID: BDB005200
Activity data available Local docking-ready structure
Dock with Q00987
Structure
/e3_file/ligand_db/generated/BDB005200/BDB005200.sdf
Basic Properties
Compound ID
E3L005200
Internal ID
BDB005200
Molecular formula
C28H32Cl2FN3O3
Molecular weight
548.486000
Exact mass
547.180475
XLogP
4.9124
TPSA
90.4600
HBA / HBD
4 / 4
Rotatable bonds
4
Heavy atoms / rings
37 / 5
Activity summary
IC50 unknown 159.00000000 nM
1 activity record(s) imported
InChIKey
UPRIKRXEOKHMPL-ZYCFHTJLSA-N
SMILES
CC(C)(C)C[C@@H]1N[C@@H](C(=O)N[C@H]2C[C@@](C)(O)C2)[C@H](c2cc(Cl)ccc2F)[C@]12C(=O)Nc1cc(Cl)ccc12
Aliases
BDBM119744 (preferred) BDBM119744 (source_id)
E3 Relation
E3 UniProt Gene / protein Relation type Ligand role Direct Functional Docking Source Evidence
Q00987 MDM2
E3 ubiquitin-protein ligase Mdm2		 reported_binder bindingdb_reported Yes No low BindingDB:BDBM119744 medium
; target=E3 ubiquitin-protein ligase Mdm2
Sources and Literature
Source Source ID Source URL Download URL DOI / PMID
BindingDB BDBM119744 Open - 10.7270/Q27S7MD6
Structure Files
Kind Format Status Docking use File / link Preparation note
canonical_2d SMILES raw Docking-ready CC(C)(C)C[C@@H]1N[C@@H](C(=O)N[C@H]2C[C@@](C)(O)C2)[C@H](c2cc(Cl)ccc2F)[C@]12C(=O)Nc1cc(Cl)ccc12 keep_bindingdb_unique
generated_3d SDF prepared Docking-ready public/e3_file/ligand_db/generated/BDB005200/BDB005200.sdf Generated from canonical SMILES
generated_3d MOL2 prepared Docking-ready public/e3_file/ligand_db/generated/BDB005200/BDB005200.mol2 Generated from canonical SMILES
docking_ready PDBQT prepared Docking-ready public/e3_file/ligand_db/generated/BDB005200/BDB005200.pdbqt Generated from canonical SMILES
image PNG prepared Reference public/e3_file/ligand_db/generated/BDB005200/BDB005200.png Generated from canonical SMILES
image SVG prepared Reference public/e3_file/ligand_db/generated/BDB005200/BDB005200.svg Generated from canonical SMILES
Activity
Target Source Assay Result Potency Literature Records
E3 ubiquitin-protein ligase Mdm2
Q00987
E3 ligase component 		BindingDB:BDBM119744 IC50 159 nM Moderate DOI: 10.7270/Q27S7MD6 1