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BDBM130166

E3L005622
Internal ID: BDB005622
Activity data available Local docking-ready structure
Dock with P09874
Structure
/e3_file/ligand_db/generated/BDB005622/BDB005622.sdf
Basic Properties
Compound ID
E3L005622
Internal ID
BDB005622
Molecular formula
C19H25N3O2
Molecular weight
327.428000
Exact mass
327.194677
XLogP
2.8807
TPSA
57.3600
HBA / HBD
4 / 2
Rotatable bonds
3
Heavy atoms / rings
24 / 4
Activity summary
IC50 unknown 150.00000000 nM
1 activity record(s) imported
InChIKey
HTWDPJAUDLZNMM-UHFFFAOYSA-N
SMILES
COc1cc(CN2CCCCC2)cc2[nH]c(=O)c3c(c12)NCCC3
Aliases
BDBM130166 (preferred) 10-methoxy-8-(piperidin-1-ylmethyl)-2,3,4,6-tetrahydro-1H-benzo[h][1,6]naphthyridin-5-one (source_name) BDBM130166 (source_id)
E3 Relation
E3 UniProt Gene / protein Relation type Ligand role Direct Functional Docking Source Evidence
P09874 PARP1;ADPRT;PPOL
Poly [ADP-ribose] polymerase 1		 reported_binder bindingdb_reported Yes No low BindingDB:BDBM130166 medium
; target=Poly [ADP-ribose] polymerase 1
Sources and Literature
Source Source ID Source URL Download URL DOI / PMID
BindingDB BDBM130166 Open - 10.7270/Q2SQ8Z3Z
PubChem CID58424946 Open -
Structure Files
Kind Format Status Docking use File / link Preparation note
canonical_2d SMILES raw Docking-ready COc1cc(CN2CCCCC2)cc2[nH]c(=O)c3c(c12)NCCC3 keep_bindingdb_unique
generated_3d SDF prepared Docking-ready public/e3_file/ligand_db/generated/BDB005622/BDB005622.sdf Generated from canonical SMILES
generated_3d MOL2 prepared Docking-ready public/e3_file/ligand_db/generated/BDB005622/BDB005622.mol2 Generated from canonical SMILES
docking_ready PDBQT prepared Docking-ready public/e3_file/ligand_db/generated/BDB005622/BDB005622.pdbqt Generated from canonical SMILES
image PNG prepared Reference public/e3_file/ligand_db/generated/BDB005622/BDB005622.png Generated from canonical SMILES
image SVG prepared Reference public/e3_file/ligand_db/generated/BDB005622/BDB005622.svg Generated from canonical SMILES
Activity
Target Source Assay Result Potency Literature Records
Poly [ADP-ribose] polymerase 1
P09874
E3 ligase component 		BindingDB:BDBM130166 IC50 150 nM Moderate DOI: 10.7270/Q2SQ8Z3Z 1