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BDBM130180

E3L005636
Internal ID: BDB005636
Activity data available Local docking-ready structure
Dock with P09874
Structure
/e3_file/ligand_db/generated/BDB005636/BDB005636.sdf
Basic Properties
Compound ID
E3L005636
Internal ID
BDB005636
Molecular formula
C15H19N3O2
Molecular weight
273.336000
Exact mass
273.147727
XLogP
1.6534
TPSA
68.3600
HBA / HBD
4 / 3
Rotatable bonds
2
Heavy atoms / rings
20 / 3
Activity summary
IC50 unknown 750.00000000 nM
1 activity record(s) imported
InChIKey
DFGSMMFEGSUPDD-UHFFFAOYSA-N
SMILES
CN(C)Cc1cc(O)c2c3c(c(=O)[nH]c2c1)CCCN3
Aliases
BDBM130180 (preferred) 8-[(Dimethylamino)methyl]-10-hydroxy-1,2,3,4-tetrahydrobenzo[h][1,6]naphthyridine-5-(6H)-one (source_name) BDBM130180 (source_id)
E3 Relation
E3 UniProt Gene / protein Relation type Ligand role Direct Functional Docking Source Evidence
P09874 PARP1;ADPRT;PPOL
Poly [ADP-ribose] polymerase 1		 reported_binder bindingdb_reported Yes No low BindingDB:BDBM130180 medium
; target=Poly [ADP-ribose] polymerase 1
Sources and Literature
Source Source ID Source URL Download URL DOI / PMID
BindingDB BDBM130180 Open - 10.7270/Q2SQ8Z3Z
PubChem CID58424873 Open -
Structure Files
Kind Format Status Docking use File / link Preparation note
canonical_2d SMILES raw Docking-ready CN(C)Cc1cc(O)c2c3c(c(=O)[nH]c2c1)CCCN3 keep_bindingdb_unique
generated_3d SDF prepared Docking-ready public/e3_file/ligand_db/generated/BDB005636/BDB005636.sdf Generated from canonical SMILES
generated_3d MOL2 prepared Docking-ready public/e3_file/ligand_db/generated/BDB005636/BDB005636.mol2 Generated from canonical SMILES
docking_ready PDBQT prepared Docking-ready public/e3_file/ligand_db/generated/BDB005636/BDB005636.pdbqt Generated from canonical SMILES
image PNG prepared Reference public/e3_file/ligand_db/generated/BDB005636/BDB005636.png Generated from canonical SMILES
image SVG prepared Reference public/e3_file/ligand_db/generated/BDB005636/BDB005636.svg Generated from canonical SMILES
Activity
Target Source Assay Result Potency Literature Records
Poly [ADP-ribose] polymerase 1
P09874
E3 ligase component 		BindingDB:BDBM130180 IC50 750 nM Moderate DOI: 10.7270/Q2SQ8Z3Z 1