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BDBM135817

E3L005943
Internal ID: BDB005943
Activity data available Local docking-ready structure
Dock with Q99732
Structure
/e3_file/ligand_db/generated/BDB005943/BDB005943.sdf
Basic Properties
Compound ID
E3L005943
Internal ID
BDB005943
Molecular formula
C24H21N3O5
Molecular weight
431.448000
Exact mass
431.148121
XLogP
3.5530
TPSA
84.5800
HBA / HBD
6 / 0
Rotatable bonds
3
Heavy atoms / rings
32 / 6
Activity summary
IC50 unknown 2.00000000 nM
1 activity record(s) imported
InChIKey
JMKXHWHMULJLQG-UHFFFAOYSA-N
SMILES
COc1cccc2c1ncc1c(=O)n(-c3ccc4c(c3)OCO4)c(=O)n(C3CCCC3)c12
Aliases
BDBM135817 (preferred) 3-Benzo[1,3]dioxol-5-yl-1-cyclopentyl-7-methoxy-1H-pyrimido[5,4-c]quinoline-2,4-dione (source_name) BDBM135817 (source_id)
E3 Relation
E3 UniProt Gene / protein Relation type Ligand role Direct Functional Docking Source Evidence
Q99732 LITAF;PIG7;SIMPLE
Lipopolysaccharide-induced tumor necrosis factor-alpha factor		 reported_binder bindingdb_reported Yes No low BindingDB:BDBM135817 medium
; target=Lipopolysaccharide-induced tumor necrosis factor-alpha factor
Sources and Literature
Source Source ID Source URL Download URL DOI / PMID
BindingDB BDBM135817 Open - 10.7270/Q2RV0QRM
PubChem CID44187418 Open -
Structure Files
Kind Format Status Docking use File / link Preparation note
canonical_2d SMILES raw Docking-ready COc1cccc2c1ncc1c(=O)n(-c3ccc4c(c3)OCO4)c(=O)n(C3CCCC3)c12 keep_bindingdb_unique
generated_3d SDF prepared Docking-ready public/e3_file/ligand_db/generated/BDB005943/BDB005943.sdf Generated from canonical SMILES
generated_3d MOL2 prepared Docking-ready public/e3_file/ligand_db/generated/BDB005943/BDB005943.mol2 Generated from canonical SMILES
docking_ready PDBQT prepared Docking-ready public/e3_file/ligand_db/generated/BDB005943/BDB005943.pdbqt Generated from canonical SMILES
image PNG prepared Reference public/e3_file/ligand_db/generated/BDB005943/BDB005943.png Generated from canonical SMILES
image SVG prepared Reference public/e3_file/ligand_db/generated/BDB005943/BDB005943.svg Generated from canonical SMILES
Activity
Target Source Assay Result Potency Literature Records
Lipopolysaccharide-induced tumor necrosis factor-alpha factor
Q99732
E3 ligase component 		BindingDB:BDBM135817 IC50 2 nM Very high DOI: 10.7270/Q2RV0QRM 1