< Back to small molecule database

BDBM135933

E3L005965
Internal ID: BDB005965
Activity data available Local docking-ready structure
Dock with O15151 Dock with Q00987
Structure
/e3_file/ligand_db/generated/BDB005965/BDB005965.sdf
Basic Properties
Compound ID
E3L005965
Internal ID
BDB005965
Molecular formula
C31H40ClNO5
Molecular weight
542.116000
Exact mass
541.259501
XLogP
5.9562
TPSA
68.2300
HBA / HBD
5 / 1
Rotatable bonds
7
Heavy atoms / rings
38 / 5
Activity summary
IC50 unknown 106.00000000 nM
2 activity record(s) imported
InChIKey
ZKJZNJOLPMJKMR-UHFFFAOYSA-N
SMILES
COc1cc2c(cc1OC(C)C)C(c1ccc(Cl)cc1)N(C1CCC(C(O)C3CCOCC3)CC1)C(=O)C2
Aliases
BDBM135933 (preferred) 1-(4-Chlorophenyl)-2-[4-[hydroxy(oxan-4-yl)methyl]cyclohexyl]-6-methoxy-7-propan-2-yloxy-1,4-dihydroisoquinolin-3-one (source_name) BDBM135933 (source_id)
E3 Relation
E3 UniProt Gene / protein Relation type Ligand role Direct Functional Docking Source Evidence
O15151 MDM4;MDMX
Protein Mdm4
reported_binder bindingdb_reported Yes No low BindingDB:BDBM135933 medium
; target=Protein Mdm4
Q00987 MDM2
E3 ubiquitin-protein ligase Mdm2
reported_binder bindingdb_reported Yes No low BindingDB:BDBM135933 medium
; target=E3 ubiquitin-protein ligase Mdm2
Sources and Literature
Source Source ID Source URL Download URL DOI / PMID
BindingDB BDBM135933 Open - 10.7270/Q2RF5SR6
PubChem CID71145919 Open -
Structure Files
Kind Format Status Docking use File / link Preparation note
canonical_2d SMILES raw Docking-ready COc1cc2c(cc1OC(C)C)C(c1ccc(Cl)cc1)N(C1CCC(C(O)C3CCOCC3)CC1)C(=O)C2 keep_bindingdb_unique
generated_3d SDF prepared Docking-ready public/e3_file/ligand_db/generated/BDB005965/BDB005965.sdf Generated from canonical SMILES
generated_3d MOL2 prepared Docking-ready public/e3_file/ligand_db/generated/BDB005965/BDB005965.mol2 Generated from canonical SMILES
docking_ready PDBQT prepared Docking-ready public/e3_file/ligand_db/generated/BDB005965/BDB005965.pdbqt Generated from canonical SMILES
image PNG prepared Reference public/e3_file/ligand_db/generated/BDB005965/BDB005965.png Generated from canonical SMILES
image SVG prepared Reference public/e3_file/ligand_db/generated/BDB005965/BDB005965.svg Generated from canonical SMILES
Activity
Target Source Assay Result Potency Literature Records
E3 ubiquitin-protein ligase Mdm2
Q00987
E3 ligase component
BindingDB:BDBM135933 IC50 106 nM Moderate DOI: 10.7270/Q2RF5SR6 1
Protein Mdm4
O15151
E3 ligase component
BindingDB:BDBM135933 IC50 30400 nM Low DOI: 10.7270/Q2RF5SR6 1