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BDBM138342

E3L005993
Internal ID: BDB005993
Activity data available Local docking-ready structure
Dock with P09874
Structure
/e3_file/ligand_db/generated/BDB005993/BDB005993.sdf
Basic Properties
Compound ID
E3L005993
Internal ID
BDB005993
Molecular formula
C23H27N3O2
Molecular weight
377.488000
Exact mass
377.210327
XLogP
2.9619
TPSA
66.6400
HBA / HBD
3 / 1
Rotatable bonds
5
Heavy atoms / rings
28 / 4
Activity summary
Kd unknown 31.00000000 nM
1 activity record(s) imported
InChIKey
BIQGCSULLOYSIK-UHFFFAOYSA-N
SMILES
Cc1ccc(CN2CCC(CN3Cc4cccc(C(N)=O)c4C3=O)CC2)cc1
Aliases
BDBM138342 (preferred) 2-[[1-[(4-methylphenyl)methyl]piperidin-4-yl]methyl]-3-oxo-1H-isoindole-4-carboxamide (source_name) BDBM138342 (source_id)
E3 Relation
E3 UniProt Gene / protein Relation type Ligand role Direct Functional Docking Source Evidence
P09874 PARP1;ADPRT;PPOL
Poly [ADP-ribose] polymerase 1		 reported_binder bindingdb_reported Yes No low BindingDB:BDBM138342 medium
; target=Poly [ADP-ribose] polymerase 1
Sources and Literature
Source Source ID Source URL Download URL DOI / PMID
BindingDB BDBM138342 Open - 10.1021/acs.jmedchem.5b00680 PMID: 26222319
PubChem CID50943478 Open -
Structure Files
Kind Format Status Docking use File / link Preparation note
canonical_2d SMILES raw Docking-ready Cc1ccc(CN2CCC(CN3Cc4cccc(C(N)=O)c4C3=O)CC2)cc1 keep_bindingdb_unique
generated_3d SDF prepared Docking-ready public/e3_file/ligand_db/generated/BDB005993/BDB005993.sdf Generated from canonical SMILES
generated_3d MOL2 prepared Docking-ready public/e3_file/ligand_db/generated/BDB005993/BDB005993.mol2 Generated from canonical SMILES
docking_ready PDBQT prepared Docking-ready public/e3_file/ligand_db/generated/BDB005993/BDB005993.pdbqt Generated from canonical SMILES
image PNG prepared Reference public/e3_file/ligand_db/generated/BDB005993/BDB005993.png Generated from canonical SMILES
image SVG prepared Reference public/e3_file/ligand_db/generated/BDB005993/BDB005993.svg Generated from canonical SMILES
Activity
Target Source Assay Result Potency Literature Records
Poly [ADP-ribose] polymerase 1
P09874
E3 ligase component 		BindingDB:BDBM138342 Kd 31 nM High DOI: 10.1021/acs.jmedchem.5b00680
PMID: 26222319 		1