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BDBM152980

E3L006780
Internal ID: BDB006780
Activity data available Local docking-ready structure
Dock with Q00987
Structure
/e3_file/ligand_db/generated/BDB006780/BDB006780.sdf
Basic Properties
Compound ID
E3L006780
Internal ID
BDB006780
Molecular formula
C38H42Cl2F2N4O8
Molecular weight
791.676000
Exact mass
790.234776
XLogP
6.7442
TPSA
157.2400
HBA / HBD
10 / 3
Rotatable bonds
15
Heavy atoms / rings
54 / 4
Activity summary
IC50 unknown 4.63000000 nM
3 activity record(s) imported
InChIKey
JGHFHBOSDORGTB-QXVSIQMFSA-N
SMILES
COCCOCCNC(=O)OCOC(=O)c1ccc(NC(=O)[C@@H]2N[C@@H](CC(C)(C)C)[C@](C#N)(c3ccc(Cl)cc3F)[C@H]2c2cccc(Cl)c2F)c(OC)c1
Aliases
BDBM152980 (preferred) BDBM152980 (source_id)
E3 Relation
E3 UniProt Gene / protein Relation type Ligand role Direct Functional Docking Source Evidence
Q00987 MDM2
E3 ubiquitin-protein ligase Mdm2		 reported_binder bindingdb_reported Yes No low BindingDB:BDBM152980 medium
; target=E3 ubiquitin-protein ligase Mdm2
Sources and Literature
Source Source ID Source URL Download URL DOI / PMID
BindingDB BDBM152980 Open - 10.7270/Q27W69XV
Structure Files
Kind Format Status Docking use File / link Preparation note
canonical_2d SMILES raw Docking-ready COCCOCCNC(=O)OCOC(=O)c1ccc(NC(=O)[C@@H]2N[C@@H](CC(C)(C)C)[C@](C#N)(c3ccc(Cl)cc3F)[C@H]2c2cccc(Cl)c2F)c(OC)c1 keep_bindingdb_unique
generated_3d SDF prepared Docking-ready public/e3_file/ligand_db/generated/BDB006780/BDB006780.sdf Generated from canonical SMILES
generated_3d MOL2 prepared Docking-ready public/e3_file/ligand_db/generated/BDB006780/BDB006780.mol2 Generated from canonical SMILES
docking_ready PDBQT prepared Docking-ready public/e3_file/ligand_db/generated/BDB006780/BDB006780.pdbqt Generated from canonical SMILES
image PNG prepared Reference public/e3_file/ligand_db/generated/BDB006780/BDB006780.png Generated from canonical SMILES
image SVG prepared Reference public/e3_file/ligand_db/generated/BDB006780/BDB006780.svg Generated from canonical SMILES
Activity
Target Source Assay Result Potency Literature Records
E3 ubiquitin-protein ligase Mdm2
Q00987
E3 ligase component 		BindingDB:BDBM152980 IC50 4.63 nM Very high DOI: 10.7270/Q27W69XV 1
E3 ubiquitin-protein ligase Mdm2
Q00987
E3 ligase component 		BindingDB:BDBM152980 IC50 41 nM High DOI: 10.7270/Q27W69XV 1
E3 ubiquitin-protein ligase Mdm2
Q00987
E3 ligase component 		BindingDB:BDBM152980 IC50 30 nM High DOI: 10.7270/Q27W69XV 1