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BDBM170267

E3L007349
Internal ID: BDB007349
Activity data available Local docking-ready structure
Dock with Q00987
Structure
/e3_file/ligand_db/generated/BDB007349/BDB007349.sdf
Basic Properties
Compound ID
E3L007349
Internal ID
BDB007349
Molecular formula
C29H36Cl2FN5O2
Molecular weight
576.544000
Exact mass
575.223009
XLogP
3.9042
TPSA
85.5000
HBA / HBD
5 / 4
Rotatable bonds
6
Heavy atoms / rings
39 / 5
Activity summary
IC50 < 1000.00000000 nM
1 activity record(s) imported
InChIKey
WZGWWFXVTPXVTC-ZTVFFDQVSA-N
SMILES
CC(C)(C)C[C@H]1N[C@@H](C(=O)NCCN2CCNCC2)[C@H](c2cccc(Cl)c2)[C@@]12C(=O)Nc1cc(Cl)c(F)cc12
Aliases
BDBM170267 (preferred) (2'R,3S,3'R,5'R)-6-chloro-3'-(3-chlorophenyl)-5'-(2,2-dimethylpropyl)-5-fluoro-2-oxo-N-(2-piperazin-1-ylethyl)spiro[1H-indole-3,4'-pyrrolidine]-2'-carboxamide (source_name) BDBM170267 (source_id)
E3 Relation
E3 UniProt Gene / protein Relation type Ligand role Direct Functional Docking Source Evidence
Q00987 MDM2
E3 ubiquitin-protein ligase Mdm2		 reported_binder bindingdb_reported Yes No low BindingDB:BDBM170267 medium
; target=E3 ubiquitin-protein ligase Mdm2
Sources and Literature
Source Source ID Source URL Download URL DOI / PMID
BindingDB BDBM170267 Open - 10.7270/Q2DF6Q0S
PubChem CID52937970 Open -
Structure Files
Kind Format Status Docking use File / link Preparation note
canonical_2d SMILES raw Docking-ready CC(C)(C)C[C@H]1N[C@@H](C(=O)NCCN2CCNCC2)[C@H](c2cccc(Cl)c2)[C@@]12C(=O)Nc1cc(Cl)c(F)cc12 keep_bindingdb_unique
generated_3d SDF prepared Docking-ready public/e3_file/ligand_db/generated/BDB007349/BDB007349.sdf Generated from canonical SMILES
generated_3d MOL2 prepared Docking-ready public/e3_file/ligand_db/generated/BDB007349/BDB007349.mol2 Generated from canonical SMILES
docking_ready PDBQT prepared Docking-ready public/e3_file/ligand_db/generated/BDB007349/BDB007349.pdbqt Generated from canonical SMILES
image PNG prepared Reference public/e3_file/ligand_db/generated/BDB007349/BDB007349.png Generated from canonical SMILES
image SVG prepared Reference public/e3_file/ligand_db/generated/BDB007349/BDB007349.svg Generated from canonical SMILES
Activity
Target Source Assay Result Potency Literature Records
E3 ubiquitin-protein ligase Mdm2
Q00987
E3 ligase component 		BindingDB:BDBM170267 IC50 <1000 nM Uncertain DOI: 10.7270/Q2DF6Q0S 1