< Back to small molecule database

BDBM170268

E3L007350
Internal ID: BDB007350
Activity data available Local docking-ready structure
Dock with Q00987
Structure
/e3_file/ligand_db/generated/BDB007350/BDB007350.sdf
Basic Properties
Compound ID
E3L007350
Internal ID
BDB007350
Molecular formula
C30H38Cl2FN5O2
Molecular weight
590.571000
Exact mass
589.238659
XLogP
4.2464
TPSA
76.7100
HBA / HBD
5 / 3
Rotatable bonds
6
Heavy atoms / rings
40 / 5
Activity summary
IC50 < 1000.00000000 nM
1 activity record(s) imported
InChIKey
KSUKTXCLPYRKPU-PYOQLBSMSA-N
SMILES
CN1CCN(CCNC(=O)[C@@H]2N[C@H](CC(C)(C)C)[C@]3(C(=O)Nc4cc(Cl)c(F)cc43)[C@H]2c2cccc(Cl)c2)CC1
Aliases
BDBM170268 (preferred) BDBM170268 (source_id)
E3 Relation
E3 UniProt Gene / protein Relation type Ligand role Direct Functional Docking Source Evidence
Q00987 MDM2
E3 ubiquitin-protein ligase Mdm2
reported_binder bindingdb_reported Yes No low BindingDB:BDBM170268 medium
; target=E3 ubiquitin-protein ligase Mdm2
Sources and Literature
Source Source ID Source URL Download URL DOI / PMID
BindingDB BDBM170268 Open - 10.7270/Q2DF6Q0S
Structure Files
Kind Format Status Docking use File / link Preparation note
canonical_2d SMILES raw Docking-ready CN1CCN(CCNC(=O)[C@@H]2N[C@H](CC(C)(C)C)[C@]3(C(=O)Nc4cc(Cl)c(F)cc43)[C@H]2c2cccc(Cl)c2)CC1 keep_bindingdb_unique
generated_3d SDF prepared Docking-ready public/e3_file/ligand_db/generated/BDB007350/BDB007350.sdf Generated from canonical SMILES
generated_3d MOL2 prepared Docking-ready public/e3_file/ligand_db/generated/BDB007350/BDB007350.mol2 Generated from canonical SMILES
docking_ready PDBQT prepared Docking-ready public/e3_file/ligand_db/generated/BDB007350/BDB007350.pdbqt Generated from canonical SMILES
image PNG prepared Reference public/e3_file/ligand_db/generated/BDB007350/BDB007350.png Generated from canonical SMILES
image SVG prepared Reference public/e3_file/ligand_db/generated/BDB007350/BDB007350.svg Generated from canonical SMILES
Activity
Target Source Assay Result Potency Literature Records
E3 ubiquitin-protein ligase Mdm2
Q00987
E3 ligase component
BindingDB:BDBM170268 IC50 <1000 nM Uncertain DOI: 10.7270/Q2DF6Q0S 1