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BDBM170309

E3L007389
Internal ID: BDB007389
Activity data available Local docking-ready structure
Dock with Q00987
Structure
/e3_file/ligand_db/generated/BDB007389/BDB007389.sdf
Basic Properties
Compound ID
E3L007389
Internal ID
BDB007389
Molecular formula
C34H43Cl2FN4O4
Molecular weight
661.646000
Exact mass
660.264539
XLogP
5.8367
TPSA
122.5500
HBA / HBD
6 / 4
Rotatable bonds
7
Heavy atoms / rings
45 / 5
Activity summary
IC50 < 3000.00000000 nM
1 activity record(s) imported
InChIKey
PCKWZFJFZKRZJN-SGUUMDGVSA-N
SMILES
CC(C)[C@H](N)C(=O)OC1CCC(NC(=O)[C@@H]2N[C@H](CC(C)(C)C)[C@]3(C(=O)Nc4cc(Cl)ccc43)[C@H]2c2cccc(Cl)c2F)CC1
Aliases
BDBM170309 (preferred) BDBM170309 (source_id)
E3 Relation
E3 UniProt Gene / protein Relation type Ligand role Direct Functional Docking Source Evidence
Q00987 MDM2
E3 ubiquitin-protein ligase Mdm2		 reported_binder bindingdb_reported Yes No low BindingDB:BDBM170309 medium
; target=E3 ubiquitin-protein ligase Mdm2
Sources and Literature
Source Source ID Source URL Download URL DOI / PMID
BindingDB BDBM170309 Open - 10.7270/Q2DF6Q0S
Structure Files
Kind Format Status Docking use File / link Preparation note
canonical_2d SMILES raw Docking-ready CC(C)[C@H](N)C(=O)OC1CCC(NC(=O)[C@@H]2N[C@H](CC(C)(C)C)[C@]3(C(=O)Nc4cc(Cl)ccc43)[C@H]2c2cccc(Cl)c2F)CC1 keep_bindingdb_unique
generated_3d SDF prepared Docking-ready public/e3_file/ligand_db/generated/BDB007389/BDB007389.sdf Generated from canonical SMILES
generated_3d MOL2 prepared Docking-ready public/e3_file/ligand_db/generated/BDB007389/BDB007389.mol2 Generated from canonical SMILES
docking_ready PDBQT prepared Docking-ready public/e3_file/ligand_db/generated/BDB007389/BDB007389.pdbqt Generated from canonical SMILES
image PNG prepared Reference public/e3_file/ligand_db/generated/BDB007389/BDB007389.png Generated from canonical SMILES
image SVG prepared Reference public/e3_file/ligand_db/generated/BDB007389/BDB007389.svg Generated from canonical SMILES
Activity
Target Source Assay Result Potency Literature Records
E3 ubiquitin-protein ligase Mdm2
Q00987
E3 ligase component 		BindingDB:BDBM170309 IC50 <3000 nM Uncertain DOI: 10.7270/Q2DF6Q0S 1