< Back to small molecule database

BDBM170375

E3L007445
Internal ID: BDB007445
Activity data available Local docking-ready structure
Dock with Q00987
Structure
/e3_file/ligand_db/generated/BDB007445/BDB007445.sdf
Basic Properties
Compound ID
E3L007445
Internal ID
BDB007445
Molecular formula
C28H34Cl2FN3O5
Molecular weight
582.500000
Exact mass
581.185955
XLogP
3.1048
TPSA
130.9200
HBA / HBD
6 / 6
Rotatable bonds
10
Heavy atoms / rings
39 / 4
Activity summary
IC50 < 5000.00000000 nM
1 activity record(s) imported
InChIKey
PCQRRVUHQZIMLN-FKUBJEGUSA-N
SMILES
CC(C)(CCO)C[C@H]1N[C@@H](C(=O)NCC[C@H](O)CO)[C@H](c2cccc(Cl)c2)[C@@]12C(=O)Nc1cc(Cl)c(F)cc12
Aliases
BDBM170375 (preferred) BDBM170375 (source_id)
E3 Relation
E3 UniProt Gene / protein Relation type Ligand role Direct Functional Docking Source Evidence
Q00987 MDM2
E3 ubiquitin-protein ligase Mdm2
reported_binder bindingdb_reported Yes No low BindingDB:BDBM170375 medium
; target=E3 ubiquitin-protein ligase Mdm2
Sources and Literature
Source Source ID Source URL Download URL DOI / PMID
BindingDB BDBM170375 Open - 10.7270/Q2DF6Q0S
Structure Files
Kind Format Status Docking use File / link Preparation note
canonical_2d SMILES raw Docking-ready CC(C)(CCO)C[C@H]1N[C@@H](C(=O)NCC[C@H](O)CO)[C@H](c2cccc(Cl)c2)[C@@]12C(=O)Nc1cc(Cl)c(F)cc12 keep_bindingdb_unique
generated_3d SDF prepared Docking-ready public/e3_file/ligand_db/generated/BDB007445/BDB007445.sdf Generated from canonical SMILES
generated_3d MOL2 prepared Docking-ready public/e3_file/ligand_db/generated/BDB007445/BDB007445.mol2 Generated from canonical SMILES
docking_ready PDBQT prepared Docking-ready public/e3_file/ligand_db/generated/BDB007445/BDB007445.pdbqt Generated from canonical SMILES
image PNG prepared Reference public/e3_file/ligand_db/generated/BDB007445/BDB007445.png Generated from canonical SMILES
image SVG prepared Reference public/e3_file/ligand_db/generated/BDB007445/BDB007445.svg Generated from canonical SMILES
Activity
Target Source Assay Result Potency Literature Records
E3 ubiquitin-protein ligase Mdm2
Q00987
E3 ligase component
BindingDB:BDBM170375 IC50 <5000 nM Uncertain DOI: 10.7270/Q2DF6Q0S 1