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BDBM179220

E3L007742
Internal ID: BDB007742
Activity data available Local docking-ready structure
Dock with Q9BQA1
Structure
/e3_file/ligand_db/generated/BDB007742/BDB007742.sdf
Basic Properties
Compound ID
E3L007742
Internal ID
BDB007742
Molecular formula
C21H23N3O2
Molecular weight
349.434000
Exact mass
349.179027
XLogP
2.3169
TPSA
68.3600
HBA / HBD
3 / 3
Rotatable bonds
5
Heavy atoms / rings
26 / 4
Activity summary
IC50 unknown 5500.00000000 nM
1 activity record(s) imported
InChIKey
NXLMAVDDPKVEMR-IBGZPJMESA-N
SMILES
O=C(NC[C@H](O)CN1CCc2ccccc2C1)c1ccc2[nH]ccc2c1
Aliases
BDBM179220 (preferred) N-[(2S)-3-(3,4-dihydro-1H-isoquinolin-2-yl)-2-hydroxypropyl]-1H-indole-5-carboxamide (source_name) BDBM179220 (source_id)
E3 Relation
E3 UniProt Gene / protein Relation type Ligand role Direct Functional Docking Source Evidence
Q9BQA1 WDR77;MEP50;WD45;HKMT1069;Nbla10071
Methylosome protein WDR77		 reported_binder bindingdb_reported Yes No low BindingDB:BDBM179220 medium
; target=Protein arginine N-methyltransferase 5
Sources and Literature
Source Source ID Source URL Download URL DOI / PMID
BindingDB BDBM179220 Open - 10.7270/Q2RN3B7D
PubChem CID117683201 Open -
Structure Files
Kind Format Status Docking use File / link Preparation note
canonical_2d SMILES raw Docking-ready O=C(NC[C@H](O)CN1CCc2ccccc2C1)c1ccc2[nH]ccc2c1 keep_bindingdb_unique
generated_3d SDF prepared Docking-ready public/e3_file/ligand_db/generated/BDB007742/BDB007742.sdf Generated from canonical SMILES
generated_3d MOL2 prepared Docking-ready public/e3_file/ligand_db/generated/BDB007742/BDB007742.mol2 Generated from canonical SMILES
docking_ready PDBQT prepared Docking-ready public/e3_file/ligand_db/generated/BDB007742/BDB007742.pdbqt Generated from canonical SMILES
image PNG prepared Reference public/e3_file/ligand_db/generated/BDB007742/BDB007742.png Generated from canonical SMILES
image SVG prepared Reference public/e3_file/ligand_db/generated/BDB007742/BDB007742.svg Generated from canonical SMILES
Activity
Target Source Assay Result Potency Literature Records
Protein arginine N-methyltransferase 5
Q9BQA1
E3 ligase component 		BindingDB:BDBM179220 IC50 5500 nM Low DOI: 10.7270/Q2RN3B7D 1