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BDBM184574

E3L007820
Internal ID: BDB007820
Activity data available Local docking-ready structure
Dock with P98170 Dock with Q13490
Structure
/e3_file/ligand_db/generated/BDB007820/BDB007820.sdf
Basic Properties
Compound ID
E3L007820
Internal ID
BDB007820
Molecular formula
C18H20N4O3
Molecular weight
340.383000
Exact mass
340.153540
XLogP
1.5702
TPSA
92.3500
HBA / HBD
5 / 3
Rotatable bonds
5
Heavy atoms / rings
25 / 3
Activity summary
IC50 unknown 505.00000000 nM
2 activity record(s) imported
InChIKey
JHOGCKICQOYEMB-ZSOXZCCMSA-N
SMILES
CN[C@@H](C)C(=O)Nc1ccc2c(n1)OC(Cc1ccccc1)C(=O)N2
Aliases
BDBM184574 (preferred) (2S)-N-(3-benzyl-2-oxo-1H-pyrido[2,3-b][1,4]oxazin-6-yl)-2-(methylamino)propanamide (source_name) BDBM184574 (source_id)
E3 Relation
E3 UniProt Gene / protein Relation type Ligand role Direct Functional Docking Source Evidence
P98170 XIAP;API3;BIRC4;IAP3
E3 ubiquitin-protein ligase XIAP		 reported_binder bindingdb_reported Yes No low BindingDB:BDBM184574 medium
; target=E3 ubiquitin-protein ligase XIAP
Q13490 BIRC2;API1;MIHB;RNF48
Baculoviral IAP repeat-containing protein 2		 reported_binder bindingdb_reported Yes No low BindingDB:BDBM184574 medium
; target=Baculoviral IAP repeat-containing protein 2
Sources and Literature
Source Source ID Source URL Download URL DOI / PMID
BindingDB BDBM184574 Open - 10.7270/Q2TH8KGK
PubChem CID89970322 Open -
Structure Files
Kind Format Status Docking use File / link Preparation note
canonical_2d SMILES raw Docking-ready CN[C@@H](C)C(=O)Nc1ccc2c(n1)OC(Cc1ccccc1)C(=O)N2 keep_bindingdb_unique
generated_3d SDF prepared Docking-ready public/e3_file/ligand_db/generated/BDB007820/BDB007820.sdf Generated from canonical SMILES
generated_3d MOL2 prepared Docking-ready public/e3_file/ligand_db/generated/BDB007820/BDB007820.mol2 Generated from canonical SMILES
docking_ready PDBQT prepared Docking-ready public/e3_file/ligand_db/generated/BDB007820/BDB007820.pdbqt Generated from canonical SMILES
image PNG prepared Reference public/e3_file/ligand_db/generated/BDB007820/BDB007820.png Generated from canonical SMILES
image SVG prepared Reference public/e3_file/ligand_db/generated/BDB007820/BDB007820.svg Generated from canonical SMILES
Activity
Target Source Assay Result Potency Literature Records
Baculoviral IAP repeat-containing protein 2
Q13490
E3 ligase component 		BindingDB:BDBM184574 IC50 505 nM Moderate DOI: 10.7270/Q2TH8KGK 1
E3 ubiquitin-protein ligase XIAP
P98170
E3 ligase component 		BindingDB:BDBM184574 IC50 5500 nM Low DOI: 10.7270/Q2TH8KGK 1