< Back to small molecule database

BDBM192171

E3L008031
Internal ID: BDB008031
Activity data available Local docking-ready structure
Dock with Q00987
Structure
/e3_file/ligand_db/generated/BDB008031/BDB008031.sdf
Basic Properties
Compound ID
E3L008031
Internal ID
BDB008031
Molecular formula
C25H28ClN3O5
Molecular weight
485.968000
Exact mass
485.171749
XLogP
4.3180
TPSA
111.7300
HBA / HBD
5 / 3
Rotatable bonds
8
Heavy atoms / rings
34 / 3
Activity summary
Ki unknown 11000.00000000 nM
1 activity record(s) imported
InChIKey
SGOVSFZVGXZGKN-UHFFFAOYSA-N
SMILES
CCOC(=O)c1[nH]c2cc(Cl)ccc2c1C(C(=O)NC(C)(C)C)N(C=O)Cc1ccc(O)cc1
Aliases
BDBM192171 (preferred) ethyl 3-[2-(tert-butylamino)-1-[formyl-[(4-hydroxyphenyl)methyl]amino]-2-oxoethyl]-6-chloro-1H-indole-2-carboxylate (source_name) BDBM192171 (source_id)
E3 Relation
E3 UniProt Gene / protein Relation type Ligand role Direct Functional Docking Source Evidence
Q00987 MDM2
E3 ubiquitin-protein ligase Mdm2
reported_binder bindingdb_reported Yes No low BindingDB:BDBM192171 medium
; target=E3 ubiquitin-protein ligase Mdm2
Sources and Literature
Source Source ID Source URL Download URL DOI / PMID
BindingDB BDBM192171 Open - 10.7270/Q2DR2T9N
PubChem CID56940792 Open -
Structure Files
Kind Format Status Docking use File / link Preparation note
canonical_2d SMILES raw Docking-ready CCOC(=O)c1[nH]c2cc(Cl)ccc2c1C(C(=O)NC(C)(C)C)N(C=O)Cc1ccc(O)cc1 keep_bindingdb_unique
generated_3d SDF prepared Docking-ready public/e3_file/ligand_db/generated/BDB008031/BDB008031.sdf Generated from canonical SMILES
generated_3d MOL2 prepared Docking-ready public/e3_file/ligand_db/generated/BDB008031/BDB008031.mol2 Generated from canonical SMILES
docking_ready PDBQT prepared Docking-ready public/e3_file/ligand_db/generated/BDB008031/BDB008031.pdbqt Generated from canonical SMILES
image PNG prepared Reference public/e3_file/ligand_db/generated/BDB008031/BDB008031.png Generated from canonical SMILES
image SVG prepared Reference public/e3_file/ligand_db/generated/BDB008031/BDB008031.svg Generated from canonical SMILES
Activity
Target Source Assay Result Potency Literature Records
E3 ubiquitin-protein ligase Mdm2
Q00987
E3 ligase component
BindingDB:BDBM192171 Ki 11000 nM Low DOI: 10.7270/Q2DR2T9N 1