< Back to small molecule database

BDBM192220

E3L008066
Internal ID: BDB008066
Activity data available Local docking-ready structure
Dock with Q00987
Structure
/e3_file/ligand_db/generated/BDB008066/BDB008066.sdf
Basic Properties
Compound ID
E3L008066
Internal ID
BDB008066
Molecular formula
C23H22ClF2N3O4
Molecular weight
477.895000
Exact mass
477.126690
XLogP
4.4121
TPSA
102.5000
HBA / HBD
3 / 3
Rotatable bonds
7
Heavy atoms / rings
33 / 3
Activity summary
Ki unknown 5.70000000 nM
1 activity record(s) imported
InChIKey
MHYQFNOMYJOEHQ-UHFFFAOYSA-N
SMILES
CC(C)(C)NC(=O)C(c1c(C(=O)O)[nH]c2cc(Cl)ccc12)N(C=O)Cc1c(F)cccc1F
Aliases
BDBM192220 (preferred) 3-[2-(tert-butylamino)-1-[(2,6-difluorophenyl)methyl-formylamino]-2-oxoethyl]-6-chloro-1H-indole-2-carboxylic acid (source_name) BDBM192220 (source_id)
E3 Relation
E3 UniProt Gene / protein Relation type Ligand role Direct Functional Docking Source Evidence
Q00987 MDM2
E3 ubiquitin-protein ligase Mdm2		 reported_binder bindingdb_reported Yes No low BindingDB:BDBM192220 medium
; target=E3 ubiquitin-protein ligase Mdm2
Sources and Literature
Source Source ID Source URL Download URL DOI / PMID
BindingDB BDBM192220 Open - 10.7270/Q2DR2T9N
PubChem CID87111153 Open -
Structure Files
Kind Format Status Docking use File / link Preparation note
canonical_2d SMILES raw Docking-ready CC(C)(C)NC(=O)C(c1c(C(=O)O)[nH]c2cc(Cl)ccc12)N(C=O)Cc1c(F)cccc1F keep_bindingdb_unique
generated_3d SDF prepared Docking-ready public/e3_file/ligand_db/generated/BDB008066/BDB008066.sdf Generated from canonical SMILES
generated_3d MOL2 prepared Docking-ready public/e3_file/ligand_db/generated/BDB008066/BDB008066.mol2 Generated from canonical SMILES
docking_ready PDBQT prepared Docking-ready public/e3_file/ligand_db/generated/BDB008066/BDB008066.pdbqt Generated from canonical SMILES
image PNG prepared Reference public/e3_file/ligand_db/generated/BDB008066/BDB008066.png Generated from canonical SMILES
image SVG prepared Reference public/e3_file/ligand_db/generated/BDB008066/BDB008066.svg Generated from canonical SMILES
Activity
Target Source Assay Result Potency Literature Records
E3 ubiquitin-protein ligase Mdm2
Q00987
E3 ligase component 		BindingDB:BDBM192220 Ki 5.7 nM Very high DOI: 10.7270/Q2DR2T9N 1