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BDBM200692

E3L008183
Internal ID: BDB008183
Activity data available Local docking-ready structure
Dock with P61964
Structure
/e3_file/ligand_db/generated/BDB008183/BDB008183.sdf
Basic Properties
Compound ID
E3L008183
Internal ID
BDB008183
Molecular formula
C20H37N7O4
Molecular weight
439.561000
Exact mass
439.290703
XLogP
-0.6563
TPSA
192.2900
HBA / HBD
5 / 7
Rotatable bonds
12
Heavy atoms / rings
31 / 1
Activity summary
IC50 < 1000.00000000 nM
1 activity record(s) imported
InChIKey
ZIYGXMBZMGGJEH-AWEZNQCLSA-N
SMILES
CCC(CC)(NC(C)=O)C(=O)N[C@@H](CCCNC(=N)N)C(=O)NC1(C(N)=O)CCCC1
Aliases
BDBM200692 (preferred) 1-[[(2S)-2-[(2-acetamido-2-ethylbutanoyl)amino]-5-(diaminomethylideneamino)pentanoyl]amino]cyclopentane-1-carboxamide (source_name) BDBM200692 (source_id)
E3 Relation
E3 UniProt Gene / protein Relation type Ligand role Direct Functional Docking Source Evidence
P61964 WDR5;BIG3
WD repeat-containing protein 5		 reported_binder bindingdb_reported Yes No low BindingDB:BDBM200692 medium
; target=WD repeat-containing protein 5
Sources and Literature
Source Source ID Source URL Download URL DOI / PMID
BindingDB BDBM200692 Open - 10.7270/Q27943GX
PubChem CID54765827 Open -
Structure Files
Kind Format Status Docking use File / link Preparation note
canonical_2d SMILES raw Docking-ready CCC(CC)(NC(C)=O)C(=O)N[C@@H](CCCNC(=N)N)C(=O)NC1(C(N)=O)CCCC1 keep_bindingdb_unique
generated_3d SDF prepared Docking-ready public/e3_file/ligand_db/generated/BDB008183/BDB008183.sdf Generated from canonical SMILES
generated_3d MOL2 prepared Docking-ready public/e3_file/ligand_db/generated/BDB008183/BDB008183.mol2 Generated from canonical SMILES
docking_ready PDBQT prepared Docking-ready public/e3_file/ligand_db/generated/BDB008183/BDB008183.pdbqt Generated from canonical SMILES
image PNG prepared Reference public/e3_file/ligand_db/generated/BDB008183/BDB008183.png Generated from canonical SMILES
image SVG prepared Reference public/e3_file/ligand_db/generated/BDB008183/BDB008183.svg Generated from canonical SMILES
Activity
Target Source Assay Result Potency Literature Records
WD repeat-containing protein 5
P61964
E3 ligase component 		BindingDB:BDBM200692 IC50 <1000 nM Uncertain DOI: 10.7270/Q27943GX 1