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BDBM205404

E3L008279
Internal ID: BDB008279
Activity data available Local docking-ready structure
Dock with P98170 Dock with Q13489
Structure
/e3_file/ligand_db/generated/BDB008279/BDB008279.sdf
Basic Properties
Compound ID
E3L008279
Internal ID
BDB008279
Molecular formula
C27H27N7O2
Molecular weight
481.560000
Exact mass
481.222623
XLogP
4.2931
TPSA
116.2100
HBA / HBD
5 / 4
Rotatable bonds
6
Heavy atoms / rings
36 / 5
Activity summary
IC50 unknown 317.00000000 nM
2 activity record(s) imported
InChIKey
PMURSMOAXIMMHU-UHFFFAOYSA-N
SMILES
CNC(C)C(=O)Nc1cc(-c2cccc3nc(C)c(C)n23)cc(NC(=O)c2cc3ccccc3[nH]2)n1
Aliases
BDBM205404 (preferred) N-[4-(2,3-dimethylimidazo[1,2-a]pyridin-5-yl)-6-[2-(methylamino)propanoylamino]-2-pyridinyl]-1H-indole-2-carboxamide (source_name) BDBM205404 (source_id)
E3 Relation
E3 UniProt Gene / protein Relation type Ligand role Direct Functional Docking Source Evidence
P98170 XIAP;API3;BIRC4;IAP3
E3 ubiquitin-protein ligase XIAP		 reported_binder bindingdb_reported Yes No low BindingDB:BDBM205404 medium
; target=E3 ubiquitin-protein ligase XIAP
Q13489 BIRC3;API2;MIHC;RNF49
Baculoviral IAP repeat-containing protein 3		 reported_binder bindingdb_reported Yes No low BindingDB:BDBM205404 medium
; target=Baculoviral IAP repeat-containing protein 3
Sources and Literature
Source Source ID Source URL Download URL DOI / PMID
BindingDB BDBM205404 Open - 10.7270/Q24748P2
PubChem CID117902995 Open -
Structure Files
Kind Format Status Docking use File / link Preparation note
canonical_2d SMILES raw Docking-ready CNC(C)C(=O)Nc1cc(-c2cccc3nc(C)c(C)n23)cc(NC(=O)c2cc3ccccc3[nH]2)n1 keep_bindingdb_unique
generated_3d SDF prepared Docking-ready public/e3_file/ligand_db/generated/BDB008279/BDB008279.sdf Generated from canonical SMILES
generated_3d MOL2 prepared Docking-ready public/e3_file/ligand_db/generated/BDB008279/BDB008279.mol2 Generated from canonical SMILES
docking_ready PDBQT prepared Docking-ready public/e3_file/ligand_db/generated/BDB008279/BDB008279.pdbqt Generated from canonical SMILES
image PNG prepared Reference public/e3_file/ligand_db/generated/BDB008279/BDB008279.png Generated from canonical SMILES
image SVG prepared Reference public/e3_file/ligand_db/generated/BDB008279/BDB008279.svg Generated from canonical SMILES
Activity
Target Source Assay Result Potency Literature Records
Baculoviral IAP repeat-containing protein 3
Q13489
E3 ligase component 		BindingDB:BDBM205404 IC50 348 nM Moderate DOI: 10.7270/Q24748P2 1
E3 ubiquitin-protein ligase XIAP
P98170
E3 ligase component 		BindingDB:BDBM205404 IC50 317 nM Moderate DOI: 10.7270/Q24748P2 1