< Back to small molecule database

BDBM206066

E3L008354
Internal ID: BDB008354
Activity data available Local docking-ready structure
Dock with P09874
Structure
/e3_file/ligand_db/generated/BDB008354/BDB008354.sdf
Basic Properties
Compound ID
E3L008354
Internal ID
BDB008354
Molecular formula
C30H24F4N6O2
Molecular weight
576.554000
Exact mass
576.189687
XLogP
5.2641
TPSA
96.7700
HBA / HBD
5 / 1
Rotatable bonds
5
Heavy atoms / rings
42 / 6
Activity summary
IC50 unknown 310.00000000 nM
1 activity record(s) imported
InChIKey
NONXRXUOTXVDIP-UHFFFAOYSA-N
SMILES
CC1CN(C(=O)c2cc(Cc3n[nH]c(=O)c4ccccc34)ccc2F)C(Cc2ccccc2)c2nnc(C(F)(F)F)n21
Aliases
BDBM206066 (preferred) 4-[[3-[8-benzyl-5-methyl-3-(trifluoromethyl)-6,8-dihydro-5H-[1,2,4]triazolo[4,3-a]pyrazine-7-carbonyl]-4-fluorophenyl]methyl]-2H-phthalazin-1-one (source_name) BDBM206066 (source_id)
E3 Relation
E3 UniProt Gene / protein Relation type Ligand role Direct Functional Docking Source Evidence
P09874 PARP1;ADPRT;PPOL
Poly [ADP-ribose] polymerase 1		 reported_binder bindingdb_reported Yes No low BindingDB:BDBM206066 medium
; target=Poly [ADP-ribose] polymerase 1
Sources and Literature
Source Source ID Source URL Download URL DOI / PMID
BindingDB BDBM206066 Open - 10.7270/Q2610Z5N
PubChem CID73052006 Open -
Structure Files
Kind Format Status Docking use File / link Preparation note
canonical_2d SMILES raw Docking-ready CC1CN(C(=O)c2cc(Cc3n[nH]c(=O)c4ccccc34)ccc2F)C(Cc2ccccc2)c2nnc(C(F)(F)F)n21 keep_bindingdb_unique
generated_3d SDF prepared Docking-ready public/e3_file/ligand_db/generated/BDB008354/BDB008354.sdf Generated from canonical SMILES
generated_3d MOL2 prepared Docking-ready public/e3_file/ligand_db/generated/BDB008354/BDB008354.mol2 Generated from canonical SMILES
docking_ready PDBQT prepared Docking-ready public/e3_file/ligand_db/generated/BDB008354/BDB008354.pdbqt Generated from canonical SMILES
image PNG prepared Reference public/e3_file/ligand_db/generated/BDB008354/BDB008354.png Generated from canonical SMILES
image SVG prepared Reference public/e3_file/ligand_db/generated/BDB008354/BDB008354.svg Generated from canonical SMILES
Activity
Target Source Assay Result Potency Literature Records
Poly [ADP-ribose] polymerase 1
P09874
E3 ligase component 		BindingDB:BDBM206066 IC50 310 nM Moderate DOI: 10.7270/Q2610Z5N 1