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BDBM207983

E3L008485
Internal ID: BDB008485
Activity data available Local docking-ready structure
Dock with Q00987
Structure
/e3_file/ligand_db/generated/BDB008485/BDB008485.sdf
Basic Properties
Compound ID
E3L008485
Internal ID
BDB008485
Molecular formula
C25H17Cl3N2O2
Molecular weight
483.782000
Exact mass
482.035561
XLogP
6.3997
TPSA
56.3300
HBA / HBD
2 / 2
Rotatable bonds
4
Heavy atoms / rings
32 / 5
Activity summary
Kd unknown 2100.00000000 nM
2 activity record(s) imported
InChIKey
RBSKNKJRQPLJQW-UHFFFAOYSA-N
SMILES
O=C1C(c2c[nH]c3cc(Cl)ccc23)=C(c2ccc(Cl)cc2)C(O)N1Cc1ccc(Cl)cc1
Aliases
BDBM207983 (preferred) N-(4-Chlorobenzyl)-3-(6-chloro-1H-indol-3-yl)-4-(4-chlorophenyl)-5-hydroxy-1,5-dihydro-2H-pyrrol-2-on (1h) (source_name) BDBM207983 (source_id)
E3 Relation
E3 UniProt Gene / protein Relation type Ligand role Direct Functional Docking Source Evidence
Q00987 MDM2
E3 ubiquitin-protein ligase Mdm2		 reported_binder bindingdb_reported Yes No low BindingDB:BDBM207983 medium
; target=E3 ubiquitin-protein ligase Mdm2
Sources and Literature
Source Source ID Source URL Download URL DOI / PMID
BindingDB BDBM207983 Open - 10.1021/acschembio.6b00596 PMID: 27709883
PubChem CID123133405 Open -
Structure Files
Kind Format Status Docking use File / link Preparation note
canonical_2d SMILES raw Docking-ready O=C1C(c2c[nH]c3cc(Cl)ccc23)=C(c2ccc(Cl)cc2)C(O)N1Cc1ccc(Cl)cc1 keep_bindingdb_unique
generated_3d SDF prepared Docking-ready public/e3_file/ligand_db/generated/BDB008485/BDB008485.sdf Generated from canonical SMILES
generated_3d MOL2 prepared Docking-ready public/e3_file/ligand_db/generated/BDB008485/BDB008485.mol2 Generated from canonical SMILES
docking_ready PDBQT prepared Docking-ready public/e3_file/ligand_db/generated/BDB008485/BDB008485.pdbqt Generated from canonical SMILES
image PNG prepared Reference public/e3_file/ligand_db/generated/BDB008485/BDB008485.png Generated from canonical SMILES
image SVG prepared Reference public/e3_file/ligand_db/generated/BDB008485/BDB008485.svg Generated from canonical SMILES
Activity
Target Source Assay Result Potency Literature Records
E3 ubiquitin-protein ligase Mdm2
Q00987
E3 ligase component 		BindingDB:BDBM207983 Kd 2100 nM Low DOI: 10.1021/acschembio.6b00596
PMID: 27709883 		1
E3 ubiquitin-protein ligase Mdm2
Q00987
E3 ligase component 		BindingDB:BDBM207983 Kd 40000 nM Low DOI: 10.1021/acschembio.6b00596
PMID: 27709883 		1