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BDBM212833

E3L008704
Internal ID: BDB008704
Activity data available Local docking-ready structure
Dock with Q00987
Structure
/e3_file/ligand_db/generated/BDB008704/BDB008704.sdf
Basic Properties
Compound ID
E3L008704
Internal ID
BDB008704
Molecular formula
C27H28F3N7O2
Molecular weight
539.562000
Exact mass
539.225658
XLogP
5.3201
TPSA
109.0600
HBA / HBD
7 / 2
Rotatable bonds
8
Heavy atoms / rings
39 / 5
Activity summary
IC50 unknown 16.00000000 nM
1 activity record(s) imported
InChIKey
WMLYGUKMENOYKL-OAHLLOKOSA-N
SMILES
C[C@@H](Nc1nc(C(=O)O)nc2nc(-c3cc(N(C)C)ccn3)n(Cc3ccc(C(F)(F)F)cc3)c12)C1CCC1
Aliases
BDBM212833 (preferred) 6-{[(1r)-1-Cyclobutylethyl]amino}-(dimethylamino)pyridin-2-yl]-7-[4-(trifluoromethyl)benzyl]-7h-purine-2-carboxylic acid (source_name) BDBM212833 (source_id)
E3 Relation
E3 UniProt Gene / protein Relation type Ligand role Direct Functional Docking Source Evidence
Q00987 MDM2
E3 ubiquitin-protein ligase Mdm2		 reported_binder bindingdb_reported Yes No low BindingDB:BDBM212833 medium
; target=E3 ubiquitin-protein ligase Mdm2
Sources and Literature
Source Source ID Source URL Download URL DOI / PMID
BindingDB BDBM212833 Open - 10.7270/Q2RF5X1F
PubChem CID77846541 Open -
Structure Files
Kind Format Status Docking use File / link Preparation note
canonical_2d SMILES raw Docking-ready C[C@@H](Nc1nc(C(=O)O)nc2nc(-c3cc(N(C)C)ccn3)n(Cc3ccc(C(F)(F)F)cc3)c12)C1CCC1 keep_bindingdb_unique
generated_3d SDF prepared Docking-ready public/e3_file/ligand_db/generated/BDB008704/BDB008704.sdf Generated from canonical SMILES
generated_3d MOL2 prepared Docking-ready public/e3_file/ligand_db/generated/BDB008704/BDB008704.mol2 Generated from canonical SMILES
docking_ready PDBQT prepared Docking-ready public/e3_file/ligand_db/generated/BDB008704/BDB008704.pdbqt Generated from canonical SMILES
image PNG prepared Reference public/e3_file/ligand_db/generated/BDB008704/BDB008704.png Generated from canonical SMILES
image SVG prepared Reference public/e3_file/ligand_db/generated/BDB008704/BDB008704.svg Generated from canonical SMILES
Activity
Target Source Assay Result Potency Literature Records
E3 ubiquitin-protein ligase Mdm2
Q00987
E3 ligase component 		BindingDB:BDBM212833 IC50 16 nM High DOI: 10.7270/Q2RF5X1F 1