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BDBM213939

E3L008878
Internal ID: BDB008878
Activity data available Local docking-ready structure
Dock with P09874
Structure
/e3_file/ligand_db/generated/BDB008878/BDB008878.sdf
Basic Properties
Compound ID
E3L008878
Internal ID
BDB008878
Molecular formula
C23H30FN5O2
Molecular weight
427.524000
Exact mass
427.238353
XLogP
1.3558
TPSA
81.3300
HBA / HBD
5 / 2
Rotatable bonds
6
Heavy atoms / rings
31 / 4
Activity summary
Ki unknown 1.10000000 nM
2 activity record(s) imported
InChIKey
QPHNLWQOAFXURG-UHFFFAOYSA-N
SMILES
CN1CCN(CCNC(=O)c2cc(Cc3n[nH]c(=O)c4c3CCCC4)ccc2F)CC1
Aliases
BDBM213939 (preferred) 2-fluoro-N-[2-(4-methylpiperazin-1-yl)ethyl]-5-[(4-oxo-5,6,7,8-tetrahydro-3H-phthalazin-1-yl)methyl]benzamide (source_name) BDBM213939 (source_id)
E3 Relation
E3 UniProt Gene / protein Relation type Ligand role Direct Functional Docking Source Evidence
P09874 PARP1;ADPRT;PPOL
Poly [ADP-ribose] polymerase 1		 reported_binder bindingdb_reported Yes No low BindingDB:BDBM213939 medium
; target=Poly [ADP-ribose] polymerase 1
Sources and Literature
Source Source ID Source URL Download URL DOI / PMID
BindingDB BDBM213939 Open - 10.7270/Q2BZ64XD
PubChem CID59830106 Open -
Structure Files
Kind Format Status Docking use File / link Preparation note
canonical_2d SMILES raw Docking-ready CN1CCN(CCNC(=O)c2cc(Cc3n[nH]c(=O)c4c3CCCC4)ccc2F)CC1 keep_bindingdb_unique
generated_3d SDF prepared Docking-ready public/e3_file/ligand_db/generated/BDB008878/BDB008878.sdf Generated from canonical SMILES
generated_3d MOL2 prepared Docking-ready public/e3_file/ligand_db/generated/BDB008878/BDB008878.mol2 Generated from canonical SMILES
docking_ready PDBQT prepared Docking-ready public/e3_file/ligand_db/generated/BDB008878/BDB008878.pdbqt Generated from canonical SMILES
image PNG prepared Reference public/e3_file/ligand_db/generated/BDB008878/BDB008878.png Generated from canonical SMILES
image SVG prepared Reference public/e3_file/ligand_db/generated/BDB008878/BDB008878.svg Generated from canonical SMILES
Activity
Target Source Assay Result Potency Literature Records
Poly [ADP-ribose] polymerase 1
P09874
E3 ligase component 		BindingDB:BDBM213939 Ki 1.1 nM Very high DOI: 10.7270/Q2BZ64XD 2 source records