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BDBM214045

E3L008976
Internal ID: BDB008976
Activity data available Local docking-ready structure
Dock with P09874
Structure
/e3_file/ligand_db/generated/BDB008976/BDB008976.sdf
Basic Properties
Compound ID
E3L008976
Internal ID
BDB008976
Molecular formula
C21H20N4O2
Molecular weight
360.417000
Exact mass
360.158626
XLogP
2.8868
TPSA
87.7400
HBA / HBD
4 / 2
Rotatable bonds
4
Heavy atoms / rings
27 / 4
Activity summary
Ki unknown 290.00000000 nM
1 activity record(s) imported
InChIKey
ZHQQIVQDBKEVLM-UHFFFAOYSA-N
SMILES
O=C(Nc1ccc(Cc2n[nH]c(=O)c3c2CCCC3)cn1)c1ccccc1
Aliases
BDBM214045 (preferred) N-[5-[(4-oxo-5,6,7,8-tetrahydro-3H-phthalazin-1-yl)methyl]-2-pyridinyl]benzamide (source_name) BDBM214045 (source_id)
E3 Relation
E3 UniProt Gene / protein Relation type Ligand role Direct Functional Docking Source Evidence
P09874 PARP1;ADPRT;PPOL
Poly [ADP-ribose] polymerase 1		 reported_binder bindingdb_reported Yes No low BindingDB:BDBM214045 medium
; target=Poly [ADP-ribose] polymerase 1
Sources and Literature
Source Source ID Source URL Download URL DOI / PMID
BindingDB BDBM214045 Open - 10.7270/Q2BZ64XD
PubChem CID69044809 Open -
Structure Files
Kind Format Status Docking use File / link Preparation note
canonical_2d SMILES raw Docking-ready O=C(Nc1ccc(Cc2n[nH]c(=O)c3c2CCCC3)cn1)c1ccccc1 keep_bindingdb_unique
generated_3d SDF prepared Docking-ready public/e3_file/ligand_db/generated/BDB008976/BDB008976.sdf Generated from canonical SMILES
generated_3d MOL2 prepared Docking-ready public/e3_file/ligand_db/generated/BDB008976/BDB008976.mol2 Generated from canonical SMILES
docking_ready PDBQT prepared Docking-ready public/e3_file/ligand_db/generated/BDB008976/BDB008976.pdbqt Generated from canonical SMILES
image PNG prepared Reference public/e3_file/ligand_db/generated/BDB008976/BDB008976.png Generated from canonical SMILES
image SVG prepared Reference public/e3_file/ligand_db/generated/BDB008976/BDB008976.svg Generated from canonical SMILES
Activity
Target Source Assay Result Potency Literature Records
Poly [ADP-ribose] polymerase 1
P09874
E3 ligase component 		BindingDB:BDBM214045 Ki 290 nM Moderate DOI: 10.7270/Q2BZ64XD 1